Literature DB >> 17671793

Diagnosis of basal cell carcinoma by infrared spectroscopy of whole blood samples applying soft independent modeling class analogy.

Mohammadreza Khanmohammadi1, Razieh Nasiri, Keyvan Ghasemi, Simin Samani, Amir Bagheri Garmarudi.   

Abstract

Attenuated total reflectance-Fourier transform infrared (ATR-FTIR) spectroscopy was applied to discriminate the blood samples obtained from healthy people and those with basal cell carcinoma, demonstrating high accuracy while soft independent modeling class analogy (SIMCA) chemometric technique is benefited. It was aimed to classify the normal case and cancer case blood samples through the use of ATR-FTIR spectroscopy as a rapid method while the sample preparation is so easy in comparison with the common pathologic methods. A total of 72 blood samples, including 32 cancer and 40 normal cases, were analyzed in 1,800-900 cm(-1) spectral region. Results showed 97.6% of accuracy being compared with the current clinical methods. Research results were exemplified with comparable data of other classification methods such as principal component analysis (PCA) and Cluster analysis. The residual errors in prediction (REP) of calibration model for normal and cancerous groups in SIMCA method were 0.00362 and 0.00343, respectively.

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Year:  2007        PMID: 17671793     DOI: 10.1007/s00432-007-0286-x

Source DB:  PubMed          Journal:  J Cancer Res Clin Oncol        ISSN: 0171-5216            Impact factor:   4.553


  26 in total

1.  Performing procrustes discriminant analysis with HOLMES.

Authors:  D González-Arjona; G López-Pérez; A G González
Journal:  Talanta       Date:  1999-06       Impact factor: 6.057

2.  p53 mutations and chromosome instability in basal cell carcinomas developed at an early or late age.

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Journal:  Cancer Res       Date:  1997-02-15       Impact factor: 12.701

3.  A study of secondary cutaneous amyloidosis in basal cell carcinoma in Chinese patients: lack of correlation with bcl-2 or p53 protein expression.

Authors:  W J Wang; J Y Huang; C K Wong; Y T Chang
Journal:  Arch Dermatol Res       Date:  2000-08       Impact factor: 3.017

4.  Statistical evaluation of ecosystem properties influencing the uptake of As, Cd, Co, Cu, Hg, Mn, Ni, Pb and Zn in seaweed (Eucus vesiculosus) and common mussel (Mytilus edulis).

Authors:  B D Struck; R Pelzer; P Ostapczuk; H Emons; C Mohl
Journal:  Sci Total Environ       Date:  1997-11-14       Impact factor: 7.963

5.  Immunoelectron microscopic studies on cytokeratins in human basal cell carcinoma.

Authors:  J M Habets; B Tank; V D Vuzevski; J Brevé; T Van der Kwast; T Van Joost
Journal:  Anticancer Res       Date:  1989 Jan-Feb       Impact factor: 2.480

6.  Analytical infrared spectral differences between human normal and leukaemic cells (CLL)--I.

Authors:  E Benedetti; F Papineschi; P Vergamini; R Consolini; G Spremolla
Journal:  Leuk Res       Date:  1984       Impact factor: 3.156

7.  Infrared spectra of basal cell carcinomas are distinct from non-tumor-bearing skin components.

Authors:  L M McIntosh; M Jackson; H H Mantsch; M F Stranc; D Pilavdzic; A N Crowson
Journal:  J Invest Dermatol       Date:  1999-06       Impact factor: 8.551

8.  Overexpression of p53 protein in basal cell carcinomas of human skin.

Authors:  C R Shea; N S McNutt; M Volkenandt; J Lugo; P G Prioleau; A P Albino
Journal:  Am J Pathol       Date:  1992-07       Impact factor: 4.307

9.  Inflammatory bowel diseases as an intermediate stage between normal and cancer: a FTIR-microspectroscopy approach.

Authors:  Shmuel Argov; Ranjit K Sahu; Evgenia Bernshtain; Ahmad Salman; Guy Shohat; Udi Zelig; Shaul Mordechai
Journal:  Biopolymers       Date:  2004-12-05       Impact factor: 2.505

10.  Distinct infrared spectroscopic patterns of human basal cell carcinoma of the skin.

Authors:  P T Wong; S M Goldstein; R C Grekin; T A Godwin; C Pivik; B Rigas
Journal:  Cancer Res       Date:  1993-02-15       Impact factor: 12.701

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  5 in total

1.  Application of linear discriminant analysis and Attenuated Total Reflectance Fourier Transform Infrared microspectroscopy for diagnosis of colon cancer.

Authors:  Mohammadreza Khanmohammadi; Amir Bagheri Garmarudi; Simin Samani; Keyvan Ghasemi; Ahmad Ashuri
Journal:  Pathol Oncol Res       Date:  2010-12-31       Impact factor: 3.201

2.  Automated characterisation of neutrophil activation phenotypes in ex vivo human Candida blood infections.

Authors:  Ivan Belyaev; Alessandra Marolda; Jan-Philipp Praetorius; Arjun Sarkar; Anna Medyukhina; Kerstin Hünniger; Oliver Kurzai; Marc Thilo Figge
Journal:  Comput Struct Biotechnol J       Date:  2022-05-10       Impact factor: 6.155

3.  Diagnosis of colon cancer by attenuated total reflectance-Fourier transform infrared microspectroscopy and soft independent modeling of class analogy.

Authors:  Mohammadreza Khanmohammadi; Amir Bagheri Garmarudi; Keyvan Ghasemi; Hadigheh Kazemi Jaliseh; Ahmad Kaviani
Journal:  Med Oncol       Date:  2008-11-07       Impact factor: 3.064

4.  Discrimination of Human Cell Lines by Infrared Spectroscopy and Mathematical Modeling.

Authors:  Rezvan Zendehdel; Farshad H Shirazi
Journal:  Iran J Pharm Res       Date:  2015       Impact factor: 1.696

5.  Investigation of Size and Morphology of Chitosan Nanoparticles Used in Drug Delivery System Employing Chemometric Technique.

Authors:  Mohammadreza Khanmohammadi; Hamideh Elmizadeh; Keyvan Ghasemi
Journal:  Iran J Pharm Res       Date:  2015       Impact factor: 1.696

  5 in total

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