Literature DB >> 18989761

Using spline-enhanced ordinary differential equations for PK/PD model development.

Yi Wang1, Kent Eskridge, Shunpu Zhang, Dong Wang.   

Abstract

A spline-enhanced ordinary differential equation (ODE) method is proposed for developing a proper parametric kinetic ODE model and is shown to be a useful approach to PK/PD model development. The new method differs substantially from a previously proposed model development approach using a stochastic differential equation (SDE)-based method. In the SDE-based method, a Gaussian diffusion term is introduced into an ODE to quantify the system noise. In our proposed method, we assume an ODE system with form dx/dt = A(t)x + B(t) where B(t) is a nonparametric function vector that is estimated using penalized splines. B(t) is used to construct a quantitative measure of model uncertainty useful for finding the proper model structure for a given data set. By means of two examples with simulated data, we demonstrate that the spline-enhanced ODE method can provide model diagnostics and serve as a basis for systematic model development similar to the SDE-based method. We compare and highlight the differences between the SDE-based and the spline-enhanced ODE methods of model development. We conclude that the spline-enhanced ODE method can be useful for PK/PD modeling since it is based on a relatively uncomplicated estimation algorithm which can be implemented with readily available software, provides numerically stable, robust estimation for many models, is distribution-free and allows for identification and accommodation of model deficiencies due to model misspecification.

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Year:  2008        PMID: 18989761     DOI: 10.1007/s10928-008-9101-9

Source DB:  PubMed          Journal:  J Pharmacokinet Pharmacodyn        ISSN: 1567-567X            Impact factor:   2.745


  4 in total

1.  Using stochastic differential equations for PK/PD model development.

Authors:  Niels Rode Kristensen; Henrik Madsen; Steen Hvass Ingwersen
Journal:  J Pharmacokinet Pharmacodyn       Date:  2005-02       Impact factor: 2.745

2.  Non-linear mixed-effects models with stochastic differential equations: implementation of an estimation algorithm.

Authors:  Rune V Overgaard; Niclas Jonsson; Christoffer W Tornøe; Henrik Madsen
Journal:  J Pharmacokinet Pharmacodyn       Date:  2005-02       Impact factor: 2.745

3.  Semiparametric mixed-effects analysis of PK/PD models using differential equations.

Authors:  Yi Wang; Kent M Eskridge; Shunpu Zhang
Journal:  J Pharmacokinet Pharmacodyn       Date:  2008-09-10       Impact factor: 2.745

4.  Stochastic differential equations in NONMEM: implementation, application, and comparison with ordinary differential equations.

Authors:  Christoffer W Tornøe; Rune V Overgaard; Henrik Agersø; Henrik A Nielsen; Henrik Madsen; E Niclas Jonsson
Journal:  Pharm Res       Date:  2005-08-03       Impact factor: 4.200

  4 in total
  3 in total

Review 1.  A conceptual framework for pharmacodynamic genome-wide association studies in pharmacogenomics.

Authors:  Rongling Wu; Chunfa Tong; Zhong Wang; David Mauger; Kelan Tantisira; Stanley J Szefler; Vernon M Chinchilli; Elliot Israel
Journal:  Drug Discov Today       Date:  2011-09-06       Impact factor: 7.851

Review 2.  Delivering systems pharmacogenomics towards precision medicine through mathematics.

Authors:  Yaqun Wang; Ningtao Wang; Jianxin Wang; Zhong Wang; Rongling Wu
Journal:  Adv Drug Deliv Rev       Date:  2013-03-22       Impact factor: 15.470

3.  Stochastic modeling of systems mapping in pharmacogenomics.

Authors:  Zuoheng Wang; Jiangtao Luo; Guifang Fu; Zhong Wang; Rongling Wu
Journal:  Adv Drug Deliv Rev       Date:  2013-03-22       Impact factor: 15.470

  3 in total

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