Literature DB >> 16215845

Using stochastic differential equations for PK/PD model development.

Niels Rode Kristensen1, Henrik Madsen, Steen Hvass Ingwersen.   

Abstract

A method for PK/PD model development based on stochastic differential equation models is proposed. The new method has a number of advantages compared to conventional methods. In particular, the new method avoids the exhaustive trial-and-error based search often conducted to determine the most appropriate model structure, because it allows information about the appropriate model structure to be extracted directly from data. This is accomplished through quantification of the uncertainty of the individual parts of an initial model, by means of which tools for performing model diagnostics can be constructed and guidelines for model improvement provided. Furthermore, the new method allows time-variations in key parameters to be tracked and visualized graphically, which allows important functional relationships to be revealed. Using simulated data, the performance of the new method is demonstrated by means of two examples. The first example shows how, starting from a simple assumption of linear PK, the method can be used to determine the correct nonlinear model for describing the PK of a drug following an oral dose. The second example shows how, starting from a simple assumption of no drug effect, the method can be used to determine the correct model for the nonlinear effect of a drug with known PK in an indirect response model.

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Year:  2005        PMID: 16215845     DOI: 10.1007/s10928-005-2105-9

Source DB:  PubMed          Journal:  J Pharmacokinet Pharmacodyn        ISSN: 1567-567X            Impact factor:   2.745


  6 in total

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Authors:  E N Jonsson; J R Wade; M O Karlsson
Journal:  AAPS PharmSci       Date:  2000

2.  WINSTODEC: a stochastic deconvolution interactive program for physiological and pharmacokinetic systems.

Authors:  Giovanni Sparacino; Gianluigi Pillonetto; Massimo Capello; Giuseppe De Nicolao; Claudio Cobelli
Journal:  Comput Methods Programs Biomed       Date:  2002-01       Impact factor: 5.428

3.  Non-linear mixed-effects models with stochastic differential equations: implementation of an estimation algorithm.

Authors:  Rune V Overgaard; Niclas Jonsson; Christoffer W Tornøe; Henrik Madsen
Journal:  J Pharmacokinet Pharmacodyn       Date:  2005-02       Impact factor: 2.745

4.  Three new residual error models for population PK/PD analyses.

Authors:  M O Karlsson; S L Beal; L B Sheiner
Journal:  J Pharmacokinet Biopharm       Date:  1995-12

5.  Parameter and structural identifiability concepts and ambiguities: a critical review and analysis.

Authors:  C Cobelli; J J DiStefano
Journal:  Am J Physiol       Date:  1980-07

6.  Stochastic differential equations in NONMEM: implementation, application, and comparison with ordinary differential equations.

Authors:  Christoffer W Tornøe; Rune V Overgaard; Henrik Agersø; Henrik A Nielsen; Henrik Madsen; E Niclas Jonsson
Journal:  Pharm Res       Date:  2005-08-03       Impact factor: 4.200

  6 in total
  21 in total

1.  A new stochastic approach to multi-compartment pharmacokinetic models: probability of traveling route and distribution of residence time in linear and nonlinear systems.

Authors:  Liang Zhao; Na Li; Harry Yang
Journal:  J Pharmacokinet Pharmacodyn       Date:  2010-12-17       Impact factor: 2.745

2.  A matlab framework for estimation of NLME models using stochastic differential equations: applications for estimation of insulin secretion rates.

Authors:  Stig B Mortensen; Søren Klim; Bernd Dammann; Niels R Kristensen; Henrik Madsen; Rune V Overgaard
Journal:  J Pharmacokinet Pharmacodyn       Date:  2007-06-15       Impact factor: 2.745

3.  Exterior exposure estimation using a one-compartment toxicokinetic model with blood sample measurements.

Authors:  Chu-Chih Chen; Meng-Chiuan Shih; Kuen-Yuh Wu; Pranab K Sen
Journal:  J Math Biol       Date:  2007-09-25       Impact factor: 2.259

4.  A general model-based design of experiments approach to achieve practical identifiability of pharmacokinetic and pharmacodynamic models.

Authors:  Federico Galvanin; Carlo C Ballan; Massimiliano Barolo; Fabrizio Bezzo
Journal:  J Pharmacokinet Pharmacodyn       Date:  2013-06-04       Impact factor: 2.745

5.  Exact Gradients Improve Parameter Estimation in Nonlinear Mixed Effects Models with Stochastic Dynamics.

Authors:  Helga Kristin Olafsdottir; Jacob Leander; Joachim Almquist; Mats Jirstrand
Journal:  AAPS J       Date:  2018-08-01       Impact factor: 4.009

6.  The role of stochastic gene switching in determining the pharmacodynamics of certain drugs: basic mechanisms.

Authors:  Krzysztof Puszynski; Alberto Gandolfi; Alberto d'Onofrio
Journal:  J Pharmacokinet Pharmacodyn       Date:  2016-06-28       Impact factor: 2.745

7.  Evaluation of pharmacokinetic model designs for subcutaneous infusion of insulin aspart.

Authors:  Erin J Mansell; Signe Schmidt; Paul D Docherty; Kirsten Nørgaard; John B Jørgensen; Henrik Madsen
Journal:  J Pharmacokinet Pharmacodyn       Date:  2017-08-22       Impact factor: 2.745

8.  Predictive performance for population models using stochastic differential equations applied on data from an oral glucose tolerance test.

Authors:  Jonas B Møller; Rune V Overgaard; Henrik Madsen; Torben Hansen; Oluf Pedersen; Steen H Ingwersen
Journal:  J Pharmacokinet Pharmacodyn       Date:  2009-12-16       Impact factor: 2.745

9.  Using spline-enhanced ordinary differential equations for PK/PD model development.

Authors:  Yi Wang; Kent Eskridge; Shunpu Zhang; Dong Wang
Journal:  J Pharmacokinet Pharmacodyn       Date:  2008-11-07       Impact factor: 2.745

10.  Stochastic modeling of systems mapping in pharmacogenomics.

Authors:  Zuoheng Wang; Jiangtao Luo; Guifang Fu; Zhong Wang; Rongling Wu
Journal:  Adv Drug Deliv Rev       Date:  2013-03-22       Impact factor: 15.470

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