Literature DB >> 18985645

Polymerization of alpha-hydroxy acids by ribosomes.

Atsushi Ohta1, Hiroshi Murakami, Hiroaki Suga.   

Abstract

Over 30 years ago, Fahnestock and Rich reported intriguing data showing the capability of the ribosome to polymerize phenyllactic acid. Although the polymerization was initiated and terminated randomly on polyuridic acids, the given data convincingly suggested that the generated polymer was composed of an approximately 7:3 mixture of phenyllactic acid and phenylalanine. Despite the fact that Fahnestock's conclusion was very likely correct, there have been no reports to follow up the ribosome-catalyzed polymerization of alpha-hydroxy acids until very recently. At the end of 2007, we reported messenger RNA (mRNA)-directed polyester synthesis by using the new emerging method of genetic-code reprogramming in which alpha-hydroxy acids with various kinds of side-chains are assigned to arbitrarily chosen codons. In this work, we have achieved the ribosomal synthesis of polyesters with the sequence composition and length in a fully controlled manner according to the sequence of mRNA. This Concept article describes the background of the method development and its application to the synthesis of polyesters.

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Year:  2008        PMID: 18985645     DOI: 10.1002/cbic.200800439

Source DB:  PubMed          Journal:  Chembiochem        ISSN: 1439-4227            Impact factor:   3.164


  8 in total

Review 1.  The ribosome challenge to the RNA world.

Authors:  Jessica C Bowman; Nicholas V Hud; Loren Dean Williams
Journal:  J Mol Evol       Date:  2015-03-05       Impact factor: 2.395

Review 2.  Repurposing ribosomes for synthetic biology.

Authors:  Yi Liu; Do Soon Kim; Michael C Jewett
Journal:  Curr Opin Chem Biol       Date:  2017-09-01       Impact factor: 8.822

Review 3.  Protease-resistant peptide design-empowering nature's fragile warriors against HIV.

Authors:  Matthew T Weinstock; J Nicholas Francis; Joseph S Redman; Michael S Kay
Journal:  Biopolymers       Date:  2012       Impact factor: 2.505

Review 4.  Strategies for in vitro engineering of the translation machinery.

Authors:  Michael J Hammerling; Antje Krüger; Michael C Jewett
Journal:  Nucleic Acids Res       Date:  2020-02-20       Impact factor: 16.971

5.  Expanding the limits of the second genetic code with ribozymes.

Authors:  Joongoo Lee; Kenneth E Schwieter; Andrew M Watkins; Do Soon Kim; Hao Yu; Kevin J Schwarz; Jongdoo Lim; Jaime Coronado; Michelle Byrom; Eric V Anslyn; Andrew D Ellington; Jeffrey S Moore; Michael C Jewett
Journal:  Nat Commun       Date:  2019-11-08       Impact factor: 14.919

Review 6.  Peptides before and during the nucleotide world: an origins story emphasizing cooperation between proteins and nucleic acids.

Authors:  Stephen D Fried; Kosuke Fujishima; Mikhail Makarov; Ivan Cherepashuk; Klara Hlouchova
Journal:  J R Soc Interface       Date:  2022-02-09       Impact factor: 4.118

Review 7.  Recent progress toward the templated synthesis and directed evolution of sequence-defined synthetic polymers.

Authors:  Yevgeny Brudno; David R Liu
Journal:  Chem Biol       Date:  2009-03-27

8.  Genetically encoded libraries of nonstandard peptides.

Authors:  Takashi Kawakami; Hiroshi Murakami
Journal:  J Nucleic Acids       Date:  2012-10-14
  8 in total

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