Literature DB >> 18982603

Rician noise removal by non-Local Means filtering for low signal-to-noise ratio MRI: applications to DT-MRI.

Nicolas Wiest-Daesslé1, Sylvain Prima, Pierrick Coupé, Sean Patrick Morrissey, Christian Barillot.   

Abstract

Diffusion-Weighted MRI (DW-MRI) is subject to random noise yielding measures that are different from their real values, and thus biasing the subsequently estimated tensors. The Non-Local Means (NLMeans) filter has recently been proposed to denoise MRI with high signal-to-noise ratio (SNR). This filter has been shown to allow the best restoration of image intensities for the estimation of diffusion tensors (DT) compared to state-of-the-art methods. However, for DW-MR images with high b-values (and thus low SNR), the noise, which is strictly Rician-distributed, can no longer be approximated as additive white Gaussian, as implicitly assumed in the classical formulation of the NLMeans. High b-values are typically used in high angular resolution diffusion imaging (HARDI) or q-space imaging (QSI), for which an optimal restoration is critical. In this paper, we propose to adapt the NLMeans filter to Rician noise corrupted data. Validation is performed on synthetic data and on real data for both conventional MR images and DT images. Our adaptation outperforms the original NLMeans filter in terms of peak-signal-to-noise ratio (PSNR) for DW-MRI.

Mesh:

Year:  2008        PMID: 18982603      PMCID: PMC2665702          DOI: 10.1007/978-3-540-85990-1_21

Source DB:  PubMed          Journal:  Med Image Comput Comput Assist Interv


  14 in total

1.  Diffusion tensor magnetic resonance image regularization.

Authors:  O Coulon; D C Alexander; S Arridge
Journal:  Med Image Anal       Date:  2004-03       Impact factor: 8.545

2.  A unifying theoretical and algorithmic framework for least squares methods of estimation in diffusion tensor imaging.

Authors:  Cheng Guan Koay; Lin-Ching Chang; John D Carew; Carlo Pierpaoli; Peter J Basser
Journal:  J Magn Reson       Date:  2006-07-07       Impact factor: 2.229

3.  Fast and simple calculus on tensors in the log-Euclidean framework.

Authors:  Vincent Arsigny; Pierre Fillard; Xavier Pennec; Nicholas Ayache
Journal:  Med Image Comput Comput Assist Interv       Date:  2005

4.  Non-local means variants for denoising of diffusion-weighted and diffusion tensor MRI.

Authors:  Nicolas Wiest-Daesslé; Sylvain Prima; Pierrick Coupé; Sean Patrick Morrissey; Christian Barillot
Journal:  Med Image Comput Comput Assist Interv       Date:  2007

5.  Impact of Rician adapted Non-Local Means filtering on HARDI.

Authors:  Maxime Descoteaux; Nicolas Wiest-Daesslé; Sylvain Prima; Christian Barillot; Rachid Deriche
Journal:  Med Image Comput Comput Assist Interv       Date:  2008

6.  An optimized blockwise nonlocal means denoising filter for 3-D magnetic resonance images.

Authors:  P Coupe; P Yger; S Prima; P Hellier; C Kervrann; C Barillot
Journal:  IEEE Trans Med Imaging       Date:  2008-04       Impact factor: 10.048

7.  MRI denoising using non-local means.

Authors:  José V Manjón; José Carbonell-Caballero; Juan J Lull; Gracián García-Martí; Luís Martí-Bonmatí; Montserrat Robles
Journal:  Med Image Anal       Date:  2008-02-29       Impact factor: 8.545

8.  Diffusion Tensor Estimation by Maximizing Rician Likelihood.

Authors:  Bennett Landman; Pierre-Louis Bazin; Jerry Prince
Journal:  Proc IEEE Int Conf Comput Vis       Date:  2007

9.  Usefulness of high-b-value diffusion-weighted imaging in acute cerebral infarction.

Authors:  Keiko Toyoda; Satomi Kitai; Masahiro Ida; Sadao Suga; Yutaka Aoyagi; Kunihiko Fukuda
Journal:  Eur Radiol       Date:  2006-09-13       Impact factor: 5.315

10.  High b value diffusion-weighted imaging is more sensitive to white matter degeneration in Alzheimer's disease.

Authors:  Takashi Yoshiura; Futoshi Mihara; Atsuo Tanaka; Koji Ogomori; Yasumasa Ohyagi; Takayuki Taniwaki; Takeshi Yamada; Takao Yamasaki; Atsushi Ichimiya; Naoko Kinukawa; Yasuo Kuwabara; Hiroshi Honda
Journal:  Neuroimage       Date:  2003-09       Impact factor: 6.556

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  58 in total

1.  Usability of unbiased nonlocal means for de-noising intraoperative magnetic resonance images in neurosurgery.

Authors:  Takashi Mizukuchi; Masazumi Fujii; Yuichiro Hayashi; Masatoshi Tsuzaka
Journal:  Int J Comput Assist Radiol Surg       Date:  2014-01-07       Impact factor: 2.924

2.  Efficient and robust nonlocal means denoising of MR data based on salient features matching.

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Journal:  Comput Methods Programs Biomed       Date:  2011-09-08       Impact factor: 5.428

3.  A sparse representation and dictionary learning based algorithm for image restoration in the presence of Rician noise.

Authors:  Wensheng Chen; Jie You; Binbin Pan; Zhengrong Liang; Bo Chen
Journal:  Neurocomputing       Date:  2018-04-19       Impact factor: 5.719

4.  A simple and fast adaptive nonlocal multispectral filtering algorithm for efficient noise reduction in magnetic resonance imaging.

Authors:  Mustapha Bouhrara; Michael C Maring; Richard G Spencer
Journal:  Magn Reson Imaging       Date:  2018-08-24       Impact factor: 2.546

5.  GLOBAL PDF-BASED TEMPORAL NON-LOCAL MEANS FILTERING REVEALS INDIVIDUAL DIFFERENCES IN BRAIN CONNECTIVITY.

Authors:  Jian Li; Soyoung Choi; Anand A Joshi; Jessica L Wisnowski; Richard M Leahy
Journal:  Proc IEEE Int Symp Biomed Imaging       Date:  2018-05-24

6.  Longitudinal reliability of tract-based spatial statistics in diffusion tensor imaging.

Authors:  Tara Madhyastha; Susan Mérillat; Sarah Hirsiger; Ladina Bezzola; Franziskus Liem; Thomas Grabowski; Lutz Jäncke
Journal:  Hum Brain Mapp       Date:  2014-04-03       Impact factor: 5.038

7.  BHATTACHARYYA MEDIAN OF SYMMETRIC POSITIVE-DEFINITE MATRICES AND APPLICATION TO THE DENOISING OF DIFFUSION-TENSOR FIELDS.

Authors:  Malek Charfi; Zeineb Chebbi; Maher Moakher; Baba C Vemuri
Journal:  Proc IEEE Int Symp Biomed Imaging       Date:  2013

8.  Temporal non-local means filtering for studies of intrinsic brain connectivity from individual resting fMRI.

Authors:  Jian Li; Soyoung Choi; Anand A Joshi; Jessica L Wisnowski; Richard M Leahy
Journal:  Med Image Anal       Date:  2020-01-07       Impact factor: 8.545

9.  Adapting non-local means of de-noising in intraoperative magnetic resonance imaging for brain tumor surgery.

Authors:  Takashi Mizukuchi; Masazumi Fujii; Yuichiro Hayashi; Masatoshi Tsuzaka
Journal:  Radiol Phys Technol       Date:  2013-11-27

10.  Imputation Strategy for Reliable Regional MRI Morphological Measurements.

Authors:  Shaina Sta Cruz; Ivo D Dinov; Megan M Herting; Clio González-Zacarías; Hosung Kim; Arthur W Toga; Farshid Sepehrband
Journal:  Neuroinformatics       Date:  2020-01
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