Literature DB >> 18982301

Duplex unwinding and RNP remodeling with RNA helicases.

Eckhard Jankowsky1, Margaret E Fairman.   

Abstract

RNA helicases are essential for the adenosine 5'-triphosphate (ATP)-driven rearrangement of many RNAs and RNA-protein complexes (ribonucleoproteins, RNPs) throughout RNA metabolism. We describe assays to measure RNA and RNP remodeling by RNA helicases in vitro. We show how to prepare substrates for these reactions and how to monitor unwinding of RNA duplexes and displacement of proteins from RNA using standard molecular biology techniques.

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Year:  2008        PMID: 18982301     DOI: 10.1007/978-1-60327-475-3_22

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  7 in total

1.  Intrinsic RNA binding by the eukaryotic initiation factor 4F depends on a minimal RNA length but not on the m7G cap.

Authors:  Nicholas M Kaye; Kelly J Emmett; William C Merrick; Eckhard Jankowsky
Journal:  J Biol Chem       Date:  2009-05-04       Impact factor: 5.157

2.  Functional cross-talk between distant domains of chikungunya virus non-structural protein 2 is decisive for its RNA-modulating activity.

Authors:  Pratyush Kumar Das; Andres Merits; Aleksei Lulla
Journal:  J Biol Chem       Date:  2014-01-09       Impact factor: 5.157

Review 3.  RNA helicases at work: binding and rearranging.

Authors:  Eckhard Jankowsky
Journal:  Trends Biochem Sci       Date:  2011-01       Impact factor: 13.807

4.  Synergistic effects of ATP and RNA binding to human DEAD-box protein DDX1.

Authors:  Julian N Kellner; Jochen Reinstein; Anton Meinhart
Journal:  Nucleic Acids Res       Date:  2015-02-17       Impact factor: 16.971

5.  Measuring the impact of cofactors on RNA helicase activities.

Authors:  Sarah Venus; Eckhard Jankowsky
Journal:  Methods       Date:  2022-04-14       Impact factor: 4.647

6.  Mutations in DDX59 implicate RNA helicase in the pathogenesis of orofaciodigital syndrome.

Authors:  Hanan E Shamseldin; Anna Rajab; Amal Alhashem; Ranad Shaheen; Tarfa Al-Shidi; Rana Alamro; Salma Al Harassi; Fowzan S Alkuraya
Journal:  Am J Hum Genet       Date:  2013-08-22       Impact factor: 11.025

Review 7.  RNA helicases: diverse roles in prokaryotic response to abiotic stress.

Authors:  George W Owttrim
Journal:  RNA Biol       Date:  2012-10-23       Impact factor: 4.652

  7 in total

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