Literature DB >> 18978071

Functional characterization of a higher plant sphingolipid Delta4-desaturase: defining the role of sphingosine and sphingosine-1-phosphate in Arabidopsis.

Louise V Michaelson1, Simone Zäuner, Jonathan E Markham, Richard P Haslam, Radhika Desikan, Sarah Mugford, Sandra Albrecht, Dirk Warnecke, Petra Sperling, E Heinz, Johnathan A Napier.   

Abstract

The role of Delta4-unsaturated sphingolipid long-chain bases such as sphingosine was investigated in Arabidopsis (Arabidopsis thaliana). Identification and functional characterization of the sole Arabidopsis ortholog of the sphingolipid Delta4-desaturase was achieved by heterologous expression in Pichia pastoris. A P. pastoris mutant disrupted in the endogenous sphingolipid Delta4-desaturase gene was unable to synthesize glucosylceramides. Synthesis of glucosylceramides was restored by the expression of Arabidopsis gene At4g04930, and these sphingolipids were shown to contain Delta4-unsaturated long-chain bases, confirming that this open reading frame encodes the sphingolipid Delta4-desaturase. At4g04930 has a very restricted expression pattern, transcripts only being detected in pollen and floral tissues. Arabidopsis insertion mutants disrupted in the sphingolipid Delta4-desaturase At4g04930 were isolated and found to be phenotypically normal. Sphingolipidomic profiling of a T-DNA insertion mutant indicated the absence of Delta4-unsaturated sphingolipids in floral tissue, also resulting in the reduced accumulation of glucosylceramides. No difference in the response to drought or water loss was observed between wild-type plants and insertion mutants disrupted in the sphingolipid Delta4-desaturase At4g04930, nor was any difference observed in stomatal closure after treatment with abscisic acid. No differences in pollen viability between wild-type plants and insertion mutants were detected. Based on these observations, it seems unlikely that Delta4-unsaturated sphingolipids and their metabolites such as sphingosine-1-phosphate play a significant role in Arabidopsis growth and development. However, Delta4-unsaturated ceramides may play a previously unrecognized role in the channeling of substrates for the synthesis of glucosylceramides.

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Year:  2008        PMID: 18978071      PMCID: PMC2613699          DOI: 10.1104/pp.108.129411

Source DB:  PubMed          Journal:  Plant Physiol        ISSN: 0032-0889            Impact factor:   8.340


  46 in total

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Journal:  Plant J       Date:  2006-06-30       Impact factor: 6.417

2.  Degenerative spermatocyte, a novel gene encoding a transmembrane protein required for the initiation of meiosis in Drosophila spermatogenesis.

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Journal:  Mol Gen Genet       Date:  1996-11-27

3.  Identification and characterization of a sphingolipid delta 4-desaturase family.

Authors:  Philipp Ternes; Stephan Franke; Ulrich Zähringer; Petra Sperling; Ernst Heinz
Journal:  J Biol Chem       Date:  2002-04-05       Impact factor: 5.157

4.  Genome-wide insertional mutagenesis of Arabidopsis thaliana.

Authors:  José M Alonso; Anna N Stepanova; Thomas J Leisse; Christopher J Kim; Huaming Chen; Paul Shinn; Denise K Stevenson; Justin Zimmerman; Pascual Barajas; Rosa Cheuk; Carmelita Gadrinab; Collen Heller; Albert Jeske; Eric Koesema; Cristina C Meyers; Holly Parker; Lance Prednis; Yasser Ansari; Nathan Choy; Hashim Deen; Michael Geralt; Nisha Hazari; Emily Hom; Meagan Karnes; Celene Mulholland; Ral Ndubaku; Ian Schmidt; Plinio Guzman; Laura Aguilar-Henonin; Markus Schmid; Detlef Weigel; David E Carter; Trudy Marchand; Eddy Risseeuw; Debra Brogden; Albana Zeko; William L Crosby; Charles C Berry; Joseph R Ecker
Journal:  Science       Date:  2003-08-01       Impact factor: 47.728

5.  Sphingolipid long-chain base hydroxylation is important for growth and regulation of sphingolipid content and composition in Arabidopsis.

Authors:  Ming Chen; Jonathan E Markham; Charles R Dietrich; Jan G Jaworski; Edgar B Cahoon
Journal:  Plant Cell       Date:  2008-07-08       Impact factor: 11.277

6.  Involvement of sphingoid bases in mediating reactive oxygen intermediate production and programmed cell death in Arabidopsis.

Authors:  Lihua Shi; Jacek Bielawski; Jinye Mu; Haili Dong; Chong Teng; Jian Zhang; Xiaohui Yang; Nario Tomishige; Kentaro Hanada; Yusuf A Hannun; Jianru Zuo
Journal:  Cell Res       Date:  2007-12       Impact factor: 25.617

7.  Rapid measurement of sphingolipids from Arabidopsis thaliana by reversed-phase high-performance liquid chromatography coupled to electrospray ionization tandem mass spectrometry.

Authors:  Jonathan E Markham; Jan G Jaworski
Journal:  Rapid Commun Mass Spectrom       Date:  2007       Impact factor: 2.419

8.  Analysis of detergent-resistant membranes in Arabidopsis. Evidence for plasma membrane lipid rafts.

Authors:  Georg H H Borner; D Janine Sherrier; Thilo Weimar; Louise V Michaelson; Nathan D Hawkins; Andrew Macaskill; Johnathan A Napier; Michael H Beale; Kathryn S Lilley; Paul Dupree
Journal:  Plant Physiol       Date:  2004-12-23       Impact factor: 8.340

9.  Fatty acid desaturases from the microalga Thalassiosira pseudonana.

Authors:  Thierry Tonon; Olga Sayanova; Louise V Michaelson; Renwei Qing; David Harvey; Tony R Larson; Yi Li; Johnathan A Napier; Ian A Graham
Journal:  FEBS J       Date:  2005-07       Impact factor: 5.542

10.  An "Electronic Fluorescent Pictograph" browser for exploring and analyzing large-scale biological data sets.

Authors:  Debbie Winter; Ben Vinegar; Hardeep Nahal; Ron Ammar; Greg V Wilson; Nicholas J Provart
Journal:  PLoS One       Date:  2007-08-08       Impact factor: 3.240

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  45 in total

1.  Sterylglucoside catabolism in Cryptococcus neoformans with endoglycoceramidase-related protein 2 (EGCrP2), the first steryl-β-glucosidase identified in fungi.

Authors:  Takashi Watanabe; Tomoharu Ito; Hatsumi M Goda; Yohei Ishibashi; Tomofumi Miyamoto; Kazutaka Ikeda; Ryo Taguchi; Nozomu Okino; Makoto Ito
Journal:  J Biol Chem       Date:  2014-10-31       Impact factor: 5.157

2.  Quality control of fungus-specific glucosylceramide in Cryptococcus neoformans by endoglycoceramidase-related protein 1 (EGCrP1).

Authors:  Yohei Ishibashi; Kazutaka Ikeda; Keishi Sakaguchi; Nozomu Okino; Ryo Taguchi; Makoto Ito
Journal:  J Biol Chem       Date:  2011-11-09       Impact factor: 5.157

3.  Acyl-lipid metabolism.

Authors:  Yonghua Li-Beisson; Basil Shorrosh; Fred Beisson; Mats X Andersson; Vincent Arondel; Philip D Bates; Sébastien Baud; David Bird; Allan Debono; Timothy P Durrett; Rochus B Franke; Ian A Graham; Kenta Katayama; Amélie A Kelly; Tony Larson; Jonathan E Markham; Martine Miquel; Isabel Molina; Ikuo Nishida; Owen Rowland; Lacey Samuels; Katherine M Schmid; Hajime Wada; Ruth Welti; Changcheng Xu; Rémi Zallot; John Ohlrogge
Journal:  Arabidopsis Book       Date:  2010-06-11

4.  Connections between sphingosine kinase and phospholipase D in the abscisic acid signaling pathway in Arabidopsis.

Authors:  Liang Guo; Girish Mishra; Jonathan E Markham; Maoyin Li; Amanda Tawfall; Ruth Welti; Xuemin Wang
Journal:  J Biol Chem       Date:  2012-01-24       Impact factor: 5.157

5.  Cytochrome b5 reductase encoded by CBR1 is essential for a functional male gametophyte in Arabidopsis.

Authors:  Laura L Wayne; James G Wallis; Rajesh Kumar; Jonathan E Markham; John Browse
Journal:  Plant Cell       Date:  2013-08-30       Impact factor: 11.277

Review 6.  Web-queryable large-scale data sets for hypothesis generation in plant biology.

Authors:  Siobhan M Brady; Nicholas J Provart
Journal:  Plant Cell       Date:  2009-04-28       Impact factor: 11.277

7.  A multi-level study of recombinant Pichia pastoris in different oxygen conditions.

Authors:  Kristin Baumann; Marc Carnicer; Martin Dragosits; Alexandra B Graf; Johannes Stadlmann; Paula Jouhten; Hannu Maaheimo; Brigitte Gasser; Joan Albiol; Diethard Mattanovich; Pau Ferrer
Journal:  BMC Syst Biol       Date:  2010-10-22

8.  Susceptibility of Phelipanche and Orobanche species to AAL-toxin.

Authors:  Axel de Zélicourt; Grégory Montiel; Jean-Bernard Pouvreau; Séverine Thoiron; Sabine Delgrange; Philippe Simier; Philippe Delavault
Journal:  Planta       Date:  2009-08-25       Impact factor: 4.116

Review 9.  Sphingolipids as targets for treatment of fungal infections.

Authors:  Rodrigo Rollin-Pinheiro; Ashutosh Singh; Eliana Barreto-Bergter; Maurizio Del Poeta
Journal:  Future Med Chem       Date:  2016-08-09       Impact factor: 3.808

Review 10.  Regulatory role of membrane fluidity in gene expression and physiological functions.

Authors:  Dmitry A Los; Kirill S Mironov; Suleyman I Allakhverdiev
Journal:  Photosynth Res       Date:  2013-04-20       Impact factor: 3.573

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