Literature DB >> 18975309

Gene expression in systemic lupus erythematosus: bone marrow analysis differentiates active from inactive disease and reveals apoptosis and granulopoiesis signatures.

Magdalene Nakou1, Nicholas Knowlton, Mark B Frank, George Bertsias, Jeanette Osban, Clayton E Sandel, Helen Papadaki, Amalia Raptopoulou, Prodromos Sidiropoulos, Iraklis Kritikos, Ioannis Tassiulas, Michael Centola, Dimitrios T Boumpas.   

Abstract

OBJECTIVE: The cells of the immune system originate from the bone marrow, where many of them also mature. This study was undertaken to examine gene expression in the bone marrow of patients with systemic lupus erythematosus (SLE), in order to better understand the aberrant immune response in this disease.
METHODS: Bone marrow mononuclear cells (BMMCs) from 20 SLE patients (11 with active disease and 9 with inactive disease) and peripheral blood mononuclear cells (PBMCs) from 27 patients (16 with active disease and 11 with inactive disease) were studied; BMMCs and PBMCs from 7 healthy individuals and 3 osteoarthritis patients were studied as controls. Samples were analyzed on genome-scale DNA microarrays, with 21,329 genes represented.
RESULTS: We identified 102 genes involved in various biologic processes that were differentially expressed between patient and control BMMCs; 53 of them are genes that are involved in major networks, including cell death, growth, signaling, and proliferation. Comparative analysis revealed 88 genes that were differentially expressed between bone marrow and blood, the majority of which are involved in cell growth and differentiation, cellular movement and morphology, immune response, and other hematopoietic cell functions. Unsupervised clustering of highly expressed genes revealed 2 major SLE patient clusters (active disease and inactive disease) based on gene expression in bone marrow, but not in peripheral blood. The up-regulated genes in the bone marrow of patients with active disease included genes involved in cell death and granulopoiesis.
CONCLUSION: Microarray analysis of the bone marrow differentiated active from inactive SLE and provided further evidence of the role of apoptosis and granulocytes in the pathogenesis of the disease.

Entities:  

Mesh:

Year:  2008        PMID: 18975309      PMCID: PMC2760826          DOI: 10.1002/art.23961

Source DB:  PubMed          Journal:  Arthritis Rheum        ISSN: 0004-3591


  50 in total

1.  Gene expression profiling of plasma cells and plasmablasts: toward a better understanding of the late stages of B-cell differentiation.

Authors:  Karin Tarte; Fenghuang Zhan; John De Vos; Bernard Klein; John Shaughnessy
Journal:  Blood       Date:  2003-03-27       Impact factor: 22.113

2.  The role of bone marrow-derived stromal cells in the maintenance of plasma cell longevity.

Authors:  Heather A Minges Wols; Gregory H Underhill; Geoffrey S Kansas; Pamela L Witte
Journal:  J Immunol       Date:  2002-10-15       Impact factor: 5.422

3.  In vivo evidence for apoptosis in the bone marrow in systemic lupus erythematosus.

Authors:  Alastair L Hepburn; Irvin A Lampert; Joseph J Boyle; Donna Horncastle; W Fai Ng; Mark Layton; Timothy J Vyse; Marina Botto; Justin C Mason
Journal:  Ann Rheum Dis       Date:  2007-02-02       Impact factor: 19.103

Review 4.  DNA microarrays in clinical oncology.

Authors:  Sridhar Ramaswamy; Todd R Golub
Journal:  J Clin Oncol       Date:  2002-04-01       Impact factor: 44.544

5.  Antineutrophil cytoplasmic antibodies in patients with systemic lupus erythematosus.

Authors:  K Molnár; L Kovács; M Kiss; S Husz; A Dobozy; G Pokorny
Journal:  Clin Exp Dermatol       Date:  2002-01       Impact factor: 3.470

6.  Interferon-inducible gene expression signature in peripheral blood cells of patients with severe lupus.

Authors:  Emily C Baechler; Franak M Batliwalla; George Karypis; Patrick M Gaffney; Ward A Ortmann; Karl J Espe; Katherine B Shark; William J Grande; Karis M Hughes; Vivek Kapur; Peter K Gregersen; Timothy W Behrens
Journal:  Proc Natl Acad Sci U S A       Date:  2003-02-25       Impact factor: 11.205

7.  Increased apoptotic neutrophils and macrophages and impaired macrophage phagocytic clearance of apoptotic neutrophils in systemic lupus erythematosus.

Authors:  Yi Ren; Jinling Tang; M Y Mok; Albert W K Chan; Adrian Wu; C S Lau
Journal:  Arthritis Rheum       Date:  2003-10

8.  Bacterial pathogens modulate an apoptosis differentiation program in human neutrophils.

Authors:  Scott D Kobayashi; Kevin R Braughton; Adeline R Whitney; Jovanka M Voyich; Tom G Schwan; James M Musser; Frank R DeLeo
Journal:  Proc Natl Acad Sci U S A       Date:  2003-09-05       Impact factor: 11.205

9.  A novel calcium-dependent proapoptotic effect of annexin 1 on human neutrophils.

Authors:  Egle Solito; Ahmad Kamal; Francoise Russo-Marie; Julia C Buckingham; Stefano Marullo; Mauro Perretti
Journal:  FASEB J       Date:  2003-06-17       Impact factor: 5.191

10.  Interferon and granulopoiesis signatures in systemic lupus erythematosus blood.

Authors:  Lynda Bennett; A Karolina Palucka; Edsel Arce; Victoria Cantrell; Josef Borvak; Jacques Banchereau; Virginia Pascual
Journal:  J Exp Med       Date:  2003-03-17       Impact factor: 14.307

View more
  31 in total

Review 1.  Neutrophils in the pathogenesis and manifestations of SLE.

Authors:  Mariana J Kaplan
Journal:  Nat Rev Rheumatol       Date:  2011-09-27       Impact factor: 20.543

Review 2.  Microarray to deep sequencing: transcriptome and miRNA profiling to elucidate molecular pathways in systemic lupus erythematosus.

Authors:  Geeta Rai; Richa Rai; Amir Hossein Saeidian; Madhukar Rai
Journal:  Immunol Res       Date:  2016-02       Impact factor: 2.829

3.  Regulation of Chemokine Signal Integration by Activator of G-Protein Signaling 4 (AGS4).

Authors:  William G Robichaux; Melissa Branham-O'Connor; Il-Young Hwang; Ali Vural; Johne H Kehrl; Joe B Blumer
Journal:  J Pharmacol Exp Ther       Date:  2017-01-06       Impact factor: 4.030

4.  Dosage of X-linked Toll-like receptor 8 determines gender differences in the development of systemic lupus erythematosus.

Authors:  Benjamin R Umiker; Shauna Andersson; Luis Fernandez; Parimal Korgaokar; Amma Larbi; Monika Pilichowska; Craig C Weinkauf; Henry H Wortis; John F Kearney; Thereza Imanishi-Kari
Journal:  Eur J Immunol       Date:  2014-03-20       Impact factor: 5.532

5.  Netting neutrophils induce endothelial damage, infiltrate tissues, and expose immunostimulatory molecules in systemic lupus erythematosus.

Authors:  Eneida Villanueva; Srilakshmi Yalavarthi; Celine C Berthier; Jeffrey B Hodgin; Ritika Khandpur; Andrew M Lin; Cory J Rubin; Wenpu Zhao; Stephen H Olsen; Matthew Klinker; David Shealy; Michael F Denny; Joel Plumas; Laurence Chaperot; Matthias Kretzler; Allen T Bruce; Mariana J Kaplan
Journal:  J Immunol       Date:  2011-05-25       Impact factor: 5.422

Review 6.  Moving towards a molecular taxonomy of autoimmune rheumatic diseases.

Authors:  Guillermo Barturen; Lorenzo Beretta; Ricard Cervera; Ronald Van Vollenhoven; Marta E Alarcón-Riquelme
Journal:  Nat Rev Rheumatol       Date:  2018-01-24       Impact factor: 20.543

Review 7.  The role of dendritic cells in the pathogenesis of systemic lupus erythematosus.

Authors:  Justin H Fransen; Johan van der Vlag; Jurjen Ruben; Gosse J Adema; Jo H Berden; Luuk B Hilbrands
Journal:  Arthritis Res Ther       Date:  2010-04-26       Impact factor: 5.156

Review 8.  Assessing the human immune system through blood transcriptomics.

Authors:  Damien Chaussabel; Virginia Pascual; Jacques Banchereau
Journal:  BMC Biol       Date:  2010-07-01       Impact factor: 7.431

9.  Gene network analysis of bone marrow mononuclear cells reveals activation of multiple kinase pathways in human systemic lupus erythematosus.

Authors:  Magdalene Nakou; George Bertsias; Ilias Stagakis; Michael Centola; Ioannis Tassiulas; Maria Hatziapostolou; Iraklis Kritikos; George Goulielmos; Dimitrios T Boumpas; Dimitrios Iliopoulos
Journal:  PLoS One       Date:  2010-10-14       Impact factor: 3.240

10.  Rituximab therapy reduces activated B cells in both the peripheral blood and bone marrow of patients with rheumatoid arthritis: depletion of memory B cells correlates with clinical response.

Authors:  Magda Nakou; Georgios Katsikas; Prodromos Sidiropoulos; George Bertsias; Eva Papadimitraki; Amalia Raptopoulou; Helen Koutala; Helen A Papadaki; Herakles Kritikos; Dimitrios T Boumpas
Journal:  Arthritis Res Ther       Date:  2009-08-28       Impact factor: 5.156

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.