Literature DB >> 18973367

Reversible intramolecular hydrogen transfer between cysteine thiyl radicals and glycine and alanine in model peptides: absolute rate constants derived from pulse radiolysis and laser flash photolysis.

Thomas Nauser1, Giulio Casi, Willem H Koppenol, Christian Schöneich.   

Abstract

The intramolecular reaction of cysteine thiyl radicals with peptide and protein alphaC-H bonds represents a potential mechanism for irreversible protein oxidation. Here, we have measured absolute rate constants for these reversible hydrogen transfer reactions by means of pulse radiolysis and laser flash photolysis of model peptides. For N-Ac-CysGly6 and N-Ac-CysGly2AspGly3, Cys thiyl radicals abstract hydrogen atoms from Gly with k(f) = (1.0-1.1 x 10(5) s(-1), generating carbon-centered radicals, while the reverse reaction proceeds with k(r) = (8.0-8.9) x 10(5) s(-1). The forward reaction shows a normal kinetic isotope effect of k(H)/k(D) = 6.9, while the reverse reaction shows a significantly higher normal kinetic isotope effect of 17.6, suggesting a contribution of tunneling. For N-Ac-CysAla2AspAla3, cysteine thiyl radicals abstract hydrogen atoms from Ala with k(f) = (0.9-1.0) x 10(4) s(-1), while the reverse reaction proceeds with k(r) = 1.0 x 10(5) s(-1). The order of reactivity, Gly > Ala, is in accord with previous studies on intermolecular reactions of thiyl radicals with these amino acids. The fact that k(f) < k(r) suggests some secondary structure of the model peptides, which prevents the adoption of extended conformations, for which calculations of homolytic bond dissociation energies would have predicted k(f) > k(r). Despite k(f) < k(r), model calculations show that intramolecular hydrogen abstraction by Cys thiyl radicals can lead to significant oxidation of other amino acids in the presence of physiologic oxygen concentrations.

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Year:  2008        PMID: 18973367      PMCID: PMC2662404          DOI: 10.1021/jp805133u

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  21 in total

1.  Effects of structure on alpha C-H bond enthalpies of amino acid residues: relevance to H transfers in enzyme mechanisms and in protein oxidation.

Authors:  A Rauk; D Yu; J Taylor; G V Shustov; D A Block; D A Armstrong
Journal:  Biochemistry       Date:  1999-07-13       Impact factor: 3.162

Review 2.  Quantum chemical studies of radical-containing enzymes.

Authors:  Fahmi Himo; Per E M Siegbahn
Journal:  Chem Rev       Date:  2003-06       Impact factor: 60.622

3.  Mechanisms of protein damage induced by cysteine thiyl radical formation.

Authors:  Christian Schöneich
Journal:  Chem Res Toxicol       Date:  2008-03-25       Impact factor: 3.739

4.  Structure and mechanism of the glycyl radical enzyme pyruvate formate-lyase.

Authors:  A Becker; K Fritz-Wolf; W Kabsch; J Knappe; S Schultz; A F Volker Wagner
Journal:  Nat Struct Biol       Date:  1999-10

5.  Selectivity in the reactions of eaq-and OH radicals with simple peptides in aqueous solution. Optical absorption spectra of intermediates.

Authors:  M Simic; P Neta; E Hayon
Journal:  J Am Chem Soc       Date:  1970-08-12       Impact factor: 15.419

Review 6.  Kinetic factors that control the fate of thiyl radicals in cells.

Authors:  P Wardman; C von Sonntag
Journal:  Methods Enzymol       Date:  1995       Impact factor: 1.600

7.  Thiyl radicals abstract hydrogen atoms from the (alpha)C-H bonds in model peptides: absolute rate constants and effect of amino acid structure.

Authors:  Thomas Nauser; Christian Schöneich
Journal:  J Am Chem Soc       Date:  2003-02-26       Impact factor: 15.419

8.  Intramolecular transformation reaction of the glutathione thiyl radical into a non-sulphur-centred radical: a pulse-radiolysis and EPR study.

Authors:  L Grierson; K Hildenbrand; E Bothe
Journal:  Int J Radiat Biol       Date:  1992-09       Impact factor: 2.694

9.  Radical-induced chain oxidation of proteins and its inhibition by chain-breaking antioxidants.

Authors:  J Neuzil; J M Gebicki; R Stocker
Journal:  Biochem J       Date:  1993-08-01       Impact factor: 3.857

10.  Peptide cysteine thiyl radicals abstract hydrogen atoms from surrounding amino acids: the photolysis of a cystine containing model peptide.

Authors:  Olivier Mozziconacci; Victor Sharov; Todd D Williams; Bruce A Kerwin; Christian Schöneich
Journal:  J Phys Chem B       Date:  2008-07-09       Impact factor: 2.991

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  20 in total

Review 1.  Cysteine residues as catalysts for covalent peptide and protein modification: a role for thiyl radicals?

Authors:  Christian Schöneich
Journal:  Biochem Soc Trans       Date:  2011-10       Impact factor: 5.407

2.  Structure and reactivity of the N-acetyl-cysteine radical cation and anion: does radical migration occur?

Authors:  Sandra Osburn; Giel Berden; Jos Oomens; Richard A J O'Hair; Victor Ryzhov
Journal:  J Am Soc Mass Spectrom       Date:  2011-07-16       Impact factor: 3.109

3.  Mobile protons versus mobile radicals: gas-phase unimolecular chemistry of radical cations of cysteine-containing peptides.

Authors:  Adrian K Y Lam; Victor Ryzhov; Richard A J O'Hair
Journal:  J Am Soc Mass Spectrom       Date:  2010-02-01       Impact factor: 3.109

4.  Photodegradation Pathways of Protein Disulfides: Human Growth Hormone.

Authors:  Daniel Steinmann; Olivier Mozziconacci; Rupesh Bommana; John F Stobaugh; Y John Wang; Christian Schöneich
Journal:  Pharm Res       Date:  2017-09-18       Impact factor: 4.200

5.  Intramolecular hydrogen transfer reactions of thiyl radicals from glutathione: formation of carbon-centered radical at Glu, Cys, and Gly.

Authors:  Olivier Mozziconacci; Todd D Williams; Christian Schöneich
Journal:  Chem Res Toxicol       Date:  2012-07-03       Impact factor: 3.739

6.  Reversible hydrogen transfer reactions in thiyl radicals from cysteine and related molecules: absolute kinetics and equilibrium constants determined by pulse radiolysis.

Authors:  Thomas Nauser; Willem H Koppenol; Christian Schöneich
Journal:  J Phys Chem B       Date:  2012-05-01       Impact factor: 2.991

7.  Reversible hydrogen transfer reactions of cysteine thiyl radicals in peptides: the conversion of cysteine into dehydroalanine and alanine, and of alanine into dehydroalanine.

Authors:  Olivier Mozziconacci; Bruce A Kerwin; Christian Schöneich
Journal:  J Phys Chem B       Date:  2011-09-30       Impact factor: 2.991

Review 8.  Thiyl radicals and induction of protein degradation.

Authors:  Christian Schöneich
Journal:  Free Radic Res       Date:  2015-08-28

9.  Identification of D-Amino Acids in Light Exposed mAb Formulations.

Authors:  Rupesh Bommana; Natalia Subelzu; Olivier Mozziconacci; Alavattam Sreedhara; Christian Schöneich
Journal:  Pharm Res       Date:  2018-10-17       Impact factor: 4.200

10.  Hydrogen exchange equilibria in glutathione radicals: rate constants.

Authors:  Dustin Hofstetter; Thomas Nauser; Willem H Koppenol
Journal:  Chem Res Toxicol       Date:  2010-09-30       Impact factor: 3.739

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