Literature DB >> 18959312

Characterizing source-sink dynamics with genetic parentage assignments.

M Zachariah Peery1, Steven R Beissinger, Roger F House, Martine Bérubé, Laurie A Hall, Anna Sellas, Per J Palsbøll.   

Abstract

Source-sink dynamics have been suggested to characterize the population structure of many species, but the prevalence of source-sink systems in nature is uncertain because of inherent challenges in estimating migration rates among populations. Migration rates are often difficult to estimate directly with demographic methods, and indirect genetic methods are subject to a variety of assumptions that are difficult to meet or to apply to evolutionary timescales. Furthermore, such methods cannot be rigorously applied to high-gene-flow species. Here, we employ genetic parentage assignments in conjunction with demographic simulations to infer the level of immigration into a putative sink population. We use individual-based demographic models to estimate expected distributions of parent-offspring dyads under competing sink and closed-population models. By comparing the actual number of parent-offspring dyads (identified from multilocus genetic profiles) in a random sample of individuals taken from a population to expectations under these two contrasting demographic models, it is possible to estimate the rate of immigration and test hypotheses related to the role of immigration on population processes on an ecological timescale. The difference in the expected number of parent-offspring dyads between the two population models was greatest when immigration into the sink population was high, indicating that unlike traditional population genetic inference models, the highest degree of statistical power is achieved for the approach presented here when migration rates are high. We used the proposed genetic parentage approach to demonstrate that a threatened population of Marbled Murrelets (Braclhyrarmphus marmotus) appears to be supplemented by a low level of immigration (approximately 2-6% annually) from other populations.

Mesh:

Year:  2008        PMID: 18959312     DOI: 10.1890/07-2026.1

Source DB:  PubMed          Journal:  Ecology        ISSN: 0012-9658            Impact factor:   5.499


  8 in total

1.  Genetic analyses of historic and modern marbled murrelets suggest decoupling of migration and gene flow after habitat fragmentation.

Authors:  M Zachariah Peery; Laurie A Hall; Anna Sellas; Steven R Beissinger; Craig Moritz; Martine Bérubé; Martin G Raphael; S Kim Nelson; Richard T Golightly; Laura McFarlane-Tranquilla; Scott Newman; Per J Palsbøll
Journal:  Proc Biol Sci       Date:  2009-11-11       Impact factor: 5.349

2.  Detecting black bear source-sink dynamics using individual-based genetic graphs.

Authors:  Hope M Draheim; Jennifer A Moore; Dwayne Etter; Scott R Winterstein; Kim T Scribner
Journal:  Proc Biol Sci       Date:  2016-07-27       Impact factor: 5.349

3.  Conspecific versus heterospecific gene exchange between populations of Darwin's finches.

Authors:  Peter R Grant; B Rosemary Grant
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2010-04-12       Impact factor: 6.237

4.  Genetic diversity and population structure in contemporary house sparrow populations along an urbanization gradient.

Authors:  C Vangestel; J Mergeay; D A Dawson; T Callens; V Vandomme; L Lens
Journal:  Heredity (Edinb)       Date:  2012-05-16       Impact factor: 3.821

5.  Populations, pools, and peccaries: simulating the impact of ecosystem engineers on rainforest frogs.

Authors:  Max Ringler; Walter Hödl; Eva Ringler
Journal:  Behav Ecol       Date:  2015-01-29       Impact factor: 2.671

6.  Genetic Relationships of Puccinia striiformis f. sp. tritici in Southwestern and Northwestern China.

Authors:  Bingbing Jiang; Cuicui Wang; Cunwu Guo; Xuan Lv; Wenfeng Gong; Jie Chang; Hongpan He; Jing Feng; Xianming Chen; Zhanhong Ma
Journal:  Microbiol Spectr       Date:  2022-07-27

Review 7.  The trajectory of dispersal research in conservation biology. Systematic review.

Authors:  Don A Driscoll; Sam C Banks; Philip S Barton; Karen Ikin; Pia Lentini; David B Lindenmayer; Annabel L Smith; Laurence E Berry; Emma L Burns; Amanda Edworthy; Maldwyn J Evans; Rebecca Gibson; Rob Heinsohn; Brett Howland; Geoff Kay; Nicola Munro; Ben C Scheele; Ingrid Stirnemann; Dejan Stojanovic; Nici Sweaney; Nélida R Villaseñor; Martin J Westgate
Journal:  PLoS One       Date:  2014-04-17       Impact factor: 3.240

8.  Why we should care about movements: Using spatially explicit integrated population models to assess habitat source-sink dynamics.

Authors:  Matthieu Paquet; Debora Arlt; Jonas Knape; Matthew Low; Pär Forslund; Tomas Pärt
Journal:  J Anim Ecol       Date:  2020-10-20       Impact factor: 5.606

  8 in total

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