Literature DB >> 18955179

Methods of artificial enlargement of the training set for statistical shape models.

Juha Koikkalainen1, Tuomas Tölli, Kirsi Lauerma, Kari Antila, Elina Mattila, Mikko Lilja, Jyrki Lötjönen.   

Abstract

Due to the small size of training sets, statistical shape models often over-constrain the deformation in medical image segmentation. Hence, artificial enlargement of the training set has been proposed as a solution for the problem to increase the flexibility of the models. In this paper, different methods were evaluated to artificially enlarge a training set. Furthermore, the objectives were to study the effects of the size of the training set, to estimate the optimal number of deformation modes, to study the effects of different error sources, and to compare different deformation methods. The study was performed for a cardiac shape model consisting of ventricles, atria, and epicardium, and built from magnetic resonance (MR) volume images of 25 subjects. Both shape modeling and image segmentation accuracies were studied. The objectives were reached by utilizing different training sets and datasets, and two deformation methods. The evaluation proved that artificial enlargement of the training set improves both the modeling and segmentation accuracy. All but one enlargement techniques gave statistically significantly (p < 0.05) better segmentation results than the standard method without enlargement. The two best enlargement techniques were the nonrigid movement technique and the technique that combines principal component analysis (PCA) and finite element model (FEM). The optimal number of deformation modes was found to be near 100 modes in our application. The active shape model segmentation gave better segmentation accuracy than the one based on the simulated annealing optimization of the model weights.

Mesh:

Year:  2008        PMID: 18955179     DOI: 10.1109/TMI.2008.929106

Source DB:  PubMed          Journal:  IEEE Trans Med Imaging        ISSN: 0278-0062            Impact factor:   10.048


  6 in total

1.  PAIRWISE REGISTRATION OF IMAGES WITH MISSING CORRESPONDENCES DUE TO RESECTION.

Authors:  Nicha Chitphakdithai; James S Duncan
Journal:  Proc IEEE Int Symp Biomed Imaging       Date:  2010-04-14

2.  Estimation of mouse organ locations through registration of a statistical mouse atlas with micro-CT images.

Authors:  Hongkai Wang; David B Stout; Arion F Chatziioannou
Journal:  IEEE Trans Med Imaging       Date:  2011-08-18       Impact factor: 10.048

Review 3.  Artificial intelligence in pediatric and adult congenital cardiac MRI: an unmet clinical need.

Authors:  Arghavan Arafati; Peng Hu; J Paul Finn; Carsten Rickers; Andrew L Cheng; Hamid Jafarkhani; Arash Kheradvar
Journal:  Cardiovasc Diagn Ther       Date:  2019-10

4.  Modeling and representation of human hearts for volumetric measurement.

Authors:  Qiu Guan; Wanliang Wang; Guang Wu
Journal:  Comput Math Methods Med       Date:  2011-11-13       Impact factor: 2.238

5.  A Combined Random Forests and Active Contour Model Approach for Fully Automatic Segmentation of the Left Atrium in Volumetric MRI.

Authors:  Chao Ma; Gongning Luo; Kuanquan Wang
Journal:  Biomed Res Int       Date:  2017-02-19       Impact factor: 3.411

Review 6.  A review of heart chamber segmentation for structural and functional analysis using cardiac magnetic resonance imaging.

Authors:  Peng Peng; Karim Lekadir; Ali Gooya; Ling Shao; Steffen E Petersen; Alejandro F Frangi
Journal:  MAGMA       Date:  2016-01-25       Impact factor: 2.310

  6 in total

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