Literature DB >> 18952779

The phytocalpain defective kernel 1 is a novel Arabidopsis growth regulator whose activity is regulated by proteolytic processing.

Kim Leonie Johnson1, Christine Faulkner, Chris Edward Jeffree, Gwyneth Christina Ingram.   

Abstract

The role of the unique plant calpain Defective Kernel 1 (DEK1) in development has remained unclear due to the severity of mutant phenotypes. Here, we used complementation studies of the embryo-lethal mutant to dissect DEK1 protein behavior and to show that DEK1 plays a key role in growth regulation in Arabidopsis thaliana. We show that although full-length DEK1 protein localizes to membranes, it undergoes intramolecular autolytic cleavage events that release the calpain domain into the cytoplasm. The active calpain domain alone is not only necessary for DEK1 function but is sufficient for full complementation of dek1 mutants. A novel set of phenotypes, including leaf ruffling, increased leaf thickness, and abnormalities of epidermal cell interdigitation, was caused by expression of the constitutively active calpain domain. This analysis of the novel phenotypes produced by DEK1 under- and overexpression, as well as DEK1 subcellular localization and protein processing, has revealed a fundamental role for DEK1-mediated signaling in growth regulation.

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Year:  2008        PMID: 18952779      PMCID: PMC2590720          DOI: 10.1105/tpc.108.059964

Source DB:  PubMed          Journal:  Plant Cell        ISSN: 1040-4651            Impact factor:   11.277


  38 in total

1.  Autolysis of mu- and m-calpain from bovine skeletal muscle.

Authors:  P Cottin; V F Thompson; S K Sathe; A Szpacenko; D E Goll
Journal:  Biol Chem       Date:  2001-05       Impact factor: 3.915

2.  Balanced-size and long-size cloning of full-length, cap-trapped cDNAs into vectors of the novel lambda-FLC family allows enhanced gene discovery rate and functional analysis.

Authors:  P Carninci; Y Shibata; N Hayatsu; M Itoh; T Shiraki; T Hirozane; A Watahiki; K Shibata; H Konno; M Muramatsu; Y Hayashizaki
Journal:  Genomics       Date:  2001-09       Impact factor: 5.736

3.  Ca(2+)-induced structural changes in rat m-calpain revealed by partial proteolysis.

Authors:  T Moldoveanu; C M Hosfield; Z Jia; J S Elce; P L Davies
Journal:  Biochim Biophys Acta       Date:  2001-02-09

4.  Localization of m-calpain and calpastatin and studies of their association in pulmonary smooth muscle endoplasmic reticulum.

Authors:  Krishna Samanta; Pulak Kar; Biswarup Ghosh; Tapati Chakraborti; Sajal Chakraborti
Journal:  Biochim Biophys Acta       Date:  2007-07-04

5.  Domain III of calpain is a ca2+-regulated phospholipid-binding domain.

Authors:  P Tompa; Y Emori; H Sorimachi; K Suzuki; P Friedrich
Journal:  Biochem Biophys Res Commun       Date:  2001-02-09       Impact factor: 3.575

6.  The Arabidopsis thaliana MERISTEM LAYER 1 promoter specifies epidermal expression in meristems and young primordia.

Authors:  A Sessions; D Weigel; M F Yanofsky
Journal:  Plant J       Date:  1999-10       Impact factor: 6.417

7.  Cytochrome P450 CYP79B2 from Arabidopsis catalyzes the conversion of tryptophan to indole-3-acetaldoxime, a precursor of indole glucosinolates and indole-3-acetic acid.

Authors:  M D Mikkelsen; C H Hansen; U Wittstock; B A Halkier
Journal:  J Biol Chem       Date:  2000-10-27       Impact factor: 5.157

8.  Control of plant organ size by KLUH/CYP78A5-dependent intercellular signaling.

Authors:  Elena Anastasiou; Sabine Kenz; Moritz Gerstung; Daniel MacLean; Jens Timmer; Christian Fleck; Michael Lenhard
Journal:  Dev Cell       Date:  2007-12       Impact factor: 12.270

9.  A study of gibberellin homeostasis and cryptochrome-mediated blue light inhibition of hypocotyl elongation.

Authors:  Xiaoying Zhao; Xuhong Yu; Eloise Foo; Gregory M Symons; Javier Lopez; Krishnaprasad T Bendehakkalu; Jing Xiang; James L Weller; Xuanming Liu; James B Reid; Chentao Lin
Journal:  Plant Physiol       Date:  2007-07-20       Impact factor: 8.340

10.  Positional cues specify and maintain aleurone cell fate in maize endosperm development.

Authors:  P W Becraft; Y Asuncion-Crabb
Journal:  Development       Date:  2000-09       Impact factor: 6.868

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  24 in total

1.  Posttranslational Protein Modifications in Plant Metabolism.

Authors:  Giulia Friso; Klaas J van Wijk
Journal:  Plant Physiol       Date:  2015-09-03       Impact factor: 8.340

2.  Fluctuations of the transcription factor ATML1 generate the pattern of giant cells in the Arabidopsis sepal.

Authors:  Heather M Meyer; José Teles; Pau Formosa-Jordan; Yassin Refahi; Rita San-Bento; Gwyneth Ingram; Henrik Jönsson; James C W Locke; Adrienne H K Roeder
Journal:  Elife       Date:  2017-02-01       Impact factor: 8.140

3.  Endomembrane trafficking protein SEC24A regulates cell size patterning in Arabidopsis.

Authors:  Xian Qu; Prerana Rao Chatty; Adrienne H K Roeder
Journal:  Plant Physiol       Date:  2014-10-14       Impact factor: 8.340

4.  Regulation of cell wall genes in response to DEFECTIVE KERNEL1 (DEK1)-induced cell wall changes.

Authors:  Dhika Amanda; Monika S Doblin; Roberta Galletti; Antony Bacic; Gwyneth C Ingram; Kim L Johnson
Journal:  Plant Signal Behav       Date:  2017-07-10

5.  Genetic analysis of DEFECTIVE KERNEL1 loop function in three-dimensional body patterning in Physcomitrella patens.

Authors:  Viktor Demko; Pierre-François Perroud; Wenche Johansen; Charles F Delwiche; Endymion D Cooper; Pål Remme; Ako Eugene Ako; Karl G Kugler; Klaus F X Mayer; Ralph Quatrano; Odd-Arne Olsen
Journal:  Plant Physiol       Date:  2014-09-02       Impact factor: 8.340

6.  The naked endosperm genes encode duplicate INDETERMINATE domain transcription factors required for maize endosperm cell patterning and differentiation.

Authors:  Gibum Yi; Anjanasree K Neelakandan; Bryan C Gontarek; Erik Vollbrecht; Philip W Becraft
Journal:  Plant Physiol       Date:  2014-12-31       Impact factor: 8.340

7.  Proteolytic Processing of SERK3/BAK1 Regulates Plant Immunity, Development, and Cell Death.

Authors:  Jinggeng Zhou; Ping Wang; Lucas A N Claus; Daniel V Savatin; Guangyuan Xu; Shujing Wu; Xiangzong Meng; Eugenia Russinova; Ping He; Libo Shan
Journal:  Plant Physiol       Date:  2019-02-19       Impact factor: 8.340

8.  DEFECTIVE KERNEL1 (DEK1) Regulates Cell Walls in the Leaf Epidermis.

Authors:  Dhika Amanda; Monika S Doblin; Roberta Galletti; Antony Bacic; Gwyneth C Ingram; Kim L Johnson
Journal:  Plant Physiol       Date:  2016-10-17       Impact factor: 8.340

9.  The DEK1 Calpain Linker Functions in Three-Dimensional Body Patterning in Physcomitrella patens.

Authors:  Wenche Johansen; Ako Eugene Ako; Viktor Demko; Pierre-François Perroud; Stephan A Rensing; Ahmed Khaleel Mekhlif; Odd-Arne Olsen
Journal:  Plant Physiol       Date:  2016-08-09       Impact factor: 8.340

10.  Integrating the genetic and physical maps of Arabidopsis thaliana: identification of mapped alleles of cloned essential (EMB) genes.

Authors:  David Meinke; Colleen Sweeney; Rosanna Muralla
Journal:  PLoS One       Date:  2009-10-08       Impact factor: 3.240

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