Literature DB >> 18948055

The plastidial MEP pathway: unified nomenclature and resources.

Michael A Phillips1, Patricia León, Albert Boronat, Manuel Rodríguez-Concepción.   

Abstract

In plants, the plastid-localized 2-C-methyl-d-erythritol 4-phosphate (MEP) pathway provides the precursors for the synthesis of isoprenoid hormones, monoterpenes, carotenoids and the side chain of chlorophylls, tocopherols and prenylquinones. As a result of the fast progress in the elucidation and characterization of the pathway (mainly by genetic approaches in Escherichia coli and Arabidopsis thaliana), different names have been used in the literature to designate the orthologous bacterial and plant genes and the corresponding null and partial loss-of-function mutants. This has led to a confusing variety of naming conventions in this field. Here, we propose a reorganization of the various naming systems with the aim of facilitating the dissemination and sharing of genetic resources and tools central to plant isoprenoid research.

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Year:  2008        PMID: 18948055     DOI: 10.1016/j.tplants.2008.09.003

Source DB:  PubMed          Journal:  Trends Plant Sci        ISSN: 1360-1385            Impact factor:   18.313


  62 in total

1.  Terpene Specialized Metabolism in Arabidopsis thaliana.

Authors:  Dorothea Tholl; Sungbeom Lee
Journal:  Arabidopsis Book       Date:  2011-04-06

2.  Construction and analysis of EST libraries of the trans-polyisoprene producing plant, Eucommia ulmoides Oliver.

Authors:  Nobuaki Suzuki; Hirotaka Uefuji; Takashi Nishikawa; Yukio Mukai; Atsushi Yamashita; Masahira Hattori; Naotake Ogasawara; Takeshi Bamba; Ei-ichiro Fukusaki; Akio Kobayashi; Yoshiyuki Ogata; Nozomu Sakurai; Hideyuki Suzuki; Daisuke Shibata; Yoshihisa Nakazawa
Journal:  Planta       Date:  2012-06-24       Impact factor: 4.116

3.  Cloning, functional characterization and genomic organization of 1,8-cineole synthases from Lavandula.

Authors:  Zerihun A Demissie; Monica A Cella; Lukman S Sarker; Travis J Thompson; Mark R Rheault; Soheil S Mahmoud
Journal:  Plant Mol Biol       Date:  2012-05-17       Impact factor: 4.076

4.  Large scale comparative proteomics of a chloroplast Clp protease mutant reveals folding stress, altered protein homeostasis, and feedback regulation of metabolism.

Authors:  Boris Zybailov; Giulia Friso; Jitae Kim; Andrea Rudella; Verenice Ramírez Rodríguez; Yukari Asakura; Qi Sun; Klaas J van Wijk
Journal:  Mol Cell Proteomics       Date:  2009-08       Impact factor: 5.911

5.  Natural variation in monoterpene synthesis in kiwifruit: transcriptional regulation of terpene synthases by NAC and ETHYLENE-INSENSITIVE3-like transcription factors.

Authors:  Niels J Nieuwenhuizen; Xiuyin Chen; Mindy Y Wang; Adam J Matich; Ramon Lopez Perez; Andrew C Allan; Sol A Green; Ross G Atkinson
Journal:  Plant Physiol       Date:  2015-02-03       Impact factor: 8.340

6.  Characterization of reference genes for quantitative real-time PCR analysis in various tissues of Salvia miltiorrhiza.

Authors:  Yanfang Yang; Shuang Hou; Guanghong Cui; Shilin Chen; Jianhe Wei; Luqi Huang
Journal:  Mol Biol Rep       Date:  2009-08-13       Impact factor: 2.316

7.  Deoxyxylulose 5-Phosphate Synthase Controls Flux through the Methylerythritol 4-Phosphate Pathway in Arabidopsis.

Authors:  Louwrance P Wright; Johann M Rohwer; Andrea Ghirardo; Almuth Hammerbacher; Miriam Ortiz-Alcaide; Bettina Raguschke; Jörg-Peter Schnitzler; Jonathan Gershenzon; Michael A Phillips
Journal:  Plant Physiol       Date:  2014-07-01       Impact factor: 8.340

8.  Reconstruction of metabolic pathways, protein expression, and homeostasis machineries across maize bundle sheath and mesophyll chloroplasts: large-scale quantitative proteomics using the first maize genome assembly.

Authors:  Giulia Friso; Wojciech Majeran; Mingshu Huang; Qi Sun; Klaas J van Wijk
Journal:  Plant Physiol       Date:  2010-01-20       Impact factor: 8.340

9.  Feedback inhibition of deoxy-D-xylulose-5-phosphate synthase regulates the methylerythritol 4-phosphate pathway.

Authors:  Aparajita Banerjee; Yan Wu; Rahul Banerjee; Yue Li; Honggao Yan; Thomas D Sharkey
Journal:  J Biol Chem       Date:  2013-04-23       Impact factor: 5.157

10.  Comparative SNP diversity among four Eucalyptus species for genes from secondary metabolite biosynthetic pathways.

Authors:  Carsten Külheim; Suat Hui Yeoh; Jens Maintz; William J Foley; Gavin F Moran
Journal:  BMC Genomics       Date:  2009-09-24       Impact factor: 3.969

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