Literature DB >> 18940808

Mathematical models and simulations of cellular processes based on actin filaments.

Thomas D Pollard1, Julien Berro.   

Abstract

Actin filaments help to maintain the physical integrity of cells and participate in many processes that produce cellular movements. Studies of the processes that depend on actin filaments have progressed to the point where mathematical models and computer simulations are an essential part of the experimental toolkit. These quantitative models integrate knowledge about the structures of the key proteins and the rate and equilibrium constants for the reactions for comparison with a growing body of quantitative measurements of dynamic processes in live cells. Models and simulations are essential because it is impossible to appreciate by intuition alone the properties that emerge from a network of coupled reactions, particularly when the system contains many components, and force is one of the parameters.

Mesh:

Year:  2008        PMID: 18940808     DOI: 10.1074/jbc.R800043200

Source DB:  PubMed          Journal:  J Biol Chem        ISSN: 0021-9258            Impact factor:   5.157


  16 in total

1.  Simulation of cell motility that reproduces the force-velocity relationship.

Authors:  Christian H Schreiber; Murray Stewart; Thomas Duke
Journal:  Proc Natl Acad Sci U S A       Date:  2010-05-03       Impact factor: 11.205

2.  Mechano-chemical feedbacks regulate actin mesh growth in lamellipodial protrusions.

Authors:  Longhua Hu; Garegin A Papoian
Journal:  Biophys J       Date:  2010-04-21       Impact factor: 4.033

3.  Mechanisms controlling cell size and shape during isotropic cell spreading.

Authors:  Yuguang Xiong; Padmini Rangamani; Marc-Antoine Fardin; Azi Lipshtat; Benjamin Dubin-Thaler; Olivier Rossier; Michael P Sheetz; Ravi Iyengar
Journal:  Biophys J       Date:  2010-05-19       Impact factor: 4.033

4.  Two competing orientation patterns explain experimentally observed anomalies in growing actin networks.

Authors:  Julian Weichsel; Ulrich S Schwarz
Journal:  Proc Natl Acad Sci U S A       Date:  2010-03-22       Impact factor: 11.205

5.  The effects of filament aging and annealing on a model lamellipodium undergoing disassembly by severing.

Authors:  P J Michalski; A E Carlsson
Journal:  Phys Biol       Date:  2010-05-26       Impact factor: 2.583

Review 6.  A membrane reservoir at the cell surface: unfolding the plasma membrane to fuel cell shape change.

Authors:  Lauren Figard; Anna Marie Sokac
Journal:  Bioarchitecture       Date:  2014-05-20

Review 7.  Cellular Biophysics.

Authors:  Rick Horwitz
Journal:  Biophys J       Date:  2016-03-08       Impact factor: 4.033

8.  The Actin Cytoskeleton as an Active Adaptive Material.

Authors:  Shiladitya Banerjee; Margaret L Gardel; Ulrich S Schwarz
Journal:  Annu Rev Condens Matter Phys       Date:  2019-12-06       Impact factor: 16.109

Review 9.  Molecular mechanisms of system control of NF-kappaB signaling by IkappaBalpha.

Authors:  Diego U Ferreiro; Elizabeth A Komives
Journal:  Biochemistry       Date:  2010-03-02       Impact factor: 3.162

10.  Pulling-force generation by ensembles of polymerizing actin filaments.

Authors:  F Motahari; A E Carlsson
Journal:  Phys Biol       Date:  2019-12-13       Impact factor: 2.583

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