Literature DB >> 18851497

Direct observation of correlated interdomain motion in alcohol dehydrogenase.

Ralf Biehl1, Bernd Hoffmann, Michael Monkenbusch, Peter Falus, Sylvain Préost, Rudolf Merkel, Dieter Richter.   

Abstract

Interdomain motions in proteins are essential to enable or promote biochemical function. Neutron spin-echo spectroscopy is used to directly observe the domain dynamics of the protein alcohol dehydrogenase. The collective motion of domains as revealed by their coherent form factor relates to the cleft opening dynamics between the binding and the catalytic domains enabling binding and release of the functional important cofactor. The cleft opening mode hardens as a result of an overall stiffening of the domain complex due to the binding of the cofactor.

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Year:  2008        PMID: 18851497     DOI: 10.1103/PhysRevLett.101.138102

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  21 in total

1.  Functional domain motions in proteins on the ~1-100 ns timescale: comparison of neutron spin-echo spectroscopy of phosphoglycerate kinase with molecular-dynamics simulation.

Authors:  N Smolin; R Biehl; G R Kneller; D Richter; J C Smith
Journal:  Biophys J       Date:  2012-03-06       Impact factor: 4.033

2.  Large domain fluctuations on 50-ns timescale enable catalytic activity in phosphoglycerate kinase.

Authors:  R Inoue; R Biehl; T Rosenkranz; J Fitter; M Monkenbusch; A Radulescu; B Farago; D Richter
Journal:  Biophys J       Date:  2010-10-06       Impact factor: 4.033

3.  Protein self-diffusion in crowded solutions.

Authors:  Felix Roosen-Runge; Marcus Hennig; Fajun Zhang; Robert M J Jacobs; Michael Sztucki; Helmut Schober; Tilo Seydel; Frank Schreiber
Journal:  Proc Natl Acad Sci U S A       Date:  2011-07-05       Impact factor: 11.205

4.  The DFPase from Loligo vulgaris in sugar surfactant-based bicontinuous microemulsions: structure, dynamics, and enzyme activity.

Authors:  Stefan Wellert; Brigtte Tiersch; Joachim Koetz; André Richardt; Alain Lapp; Olaf Holderer; Jürgen Gäb; Marc-Michael Blum; Christoph Schulreich; Ralf Stehle; Thomas Hellweg
Journal:  Eur Biophys J       Date:  2011-03-17       Impact factor: 1.733

Review 5.  Terahertz optical measurements of correlated motions with possible allosteric function.

Authors:  Katherine A Niessen; Mengyang Xu; A G Markelz
Journal:  Biophys Rev       Date:  2015-04-07

6.  Structure and dynamics of a compact state of a multidomain protein, the mercuric ion reductase.

Authors:  Liang Hong; Melissa A Sharp; Simón Poblete; Ralf Biehl; Michaela Zamponi; Noemi Szekely; Marie-Sousai Appavou; Roland G Winkler; Rachel E Nauss; Alexander Johs; Jerry M Parks; Zheng Yi; Xiaolin Cheng; Liyuan Liang; Michael Ohl; Susan M Miller; Dieter Richter; Gerhard Gompper; Jeremy C Smith
Journal:  Biophys J       Date:  2014-07-15       Impact factor: 4.033

7.  Evidence of protein collective motions on the picosecond timescale.

Authors:  Yunfen He; J-Y Chen; J R Knab; Wenjun Zheng; A G Markelz
Journal:  Biophys J       Date:  2011-02-16       Impact factor: 4.033

8.  Nanosecond structural dynamics of intrinsically disordered β-casein micelles by neutron spectroscopy.

Authors:  Hiroshi Nakagawa; Marie-Sousai Appavou; Joachim Wuttke; Michaela Zamponi; Olaf Holderer; Tobias E Schrader; Dieter Richter; Wolfgang Doster
Journal:  Biophys J       Date:  2021-10-28       Impact factor: 4.033

9.  Neutron spin-echo studies of hemoglobin and myoglobin: multiscale internal dynamics.

Authors:  Jyotsana Lal; Peter Fouquet; Marco Maccarini; Lee Makowski
Journal:  J Mol Biol       Date:  2010-01-22       Impact factor: 5.469

10.  Stability of proteins encapsulated in Michael-type addition polyethylene glycol hydrogels.

Authors:  Zahra Ghassemi; Samuel Ruesing; Jennie B Leach; Silviya P Zustiak
Journal:  Biotechnol Bioeng       Date:  2021-10-11       Impact factor: 4.530

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