Literature DB >> 18850612

A phosphotyrosine-imprinted polymer receptor for the recognition of tyrosine phosphorylated peptides.

Marco Emgenbroich1, Cristiana Borrelli, Sudhirkumar Shinde, Issam Lazraq, Filipe Vilela, Andrew J Hall, Joakim Oxelbark, Ersilia De Lorenzi, Julien Courtois, Anna Simanova, Jeroen Verhage, Knut Irgum, Kal Karim, Börje Sellergren.   

Abstract

Hyperphosphorylation at tyrosine is commonly observed in tumor proteomes and, hence, specific phosphoproteins or phosphopeptides could serve as markers useful for cancer diagnostics and therapeutics. The analysis of such targets is, however, a challenging task, because of their commonly low abundance and the lack of robust and effective preconcentration techniques. As a robust alternative to the commonly used immunoaffinity techniques that rely on phosphotyrosine(pTyr)-specific antibodies, we have developed an epitope-imprinting strategy that leads to a synthetic pTyr-selective imprinted polymer receptor. The binding site incorporates two monourea ligands placed by preorganization around a pTyr dianion template. The tight binding site displayed good binding affinities for the pTyr template, in the range of that observed for corresponding antibodies, and a clear preference for pTyr over phosphoserine (pSer). In further analogy to the antibodies, the imprinted polymer was capable of capturing short tyrosine phosphorylated peptides in the presence of an excess of their non-phosphorylated counterparts or peptides phosphorylated at serine.

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Year:  2008        PMID: 18850612     DOI: 10.1002/chem.200801046

Source DB:  PubMed          Journal:  Chemistry        ISSN: 0947-6539            Impact factor:   5.236


  10 in total

1.  Combinatorial Design of a Sialic Acid-Imprinted Binding Site.

Authors:  Liliia Mavliutova; Elena Verduci; Sudhirkumar A Shinde; Börje Sellergren
Journal:  ACS Omega       Date:  2021-04-29

2.  Phospholipid imprinted polymers as selective endotoxin scavengers.

Authors:  Robert Sulc; Gyorgy Szekely; Sudhirkumar Shinde; Celina Wierzbicka; Filipe Vilela; David Bauer; Börje Sellergren
Journal:  Sci Rep       Date:  2017-03-17       Impact factor: 4.379

3.  Automated Protein Biomarker Analysis: on-line extraction of clinical samples by Molecularly Imprinted Polymers.

Authors:  Cecilia Rossetti; Magdalena A Świtnicka-Plak; Trine Grønhaug Halvorsen; Peter A G Cormack; Börje Sellergren; Léon Reubsaet
Journal:  Sci Rep       Date:  2017-03-17       Impact factor: 4.379

4.  Urea-Based Imprinted Polymer Hosts with Switchable Anion Preference.

Authors:  Sudhirkumar Shinde; Anil Incel; Mona Mansour; Gustaf D Olsson; Ian A Nicholls; Cem Esen; Javier Urraca; Börje Sellergren
Journal:  J Am Chem Soc       Date:  2020-06-04       Impact factor: 15.419

5.  Anion Binding Studies of Urea and Thiourea Functionalized Molecular Clefts.

Authors:  Utsab Manna; Bobby Portis; Tochukwu K Egboluche; Muhammad Nafis; Md Alamgir Hossain
Journal:  Front Chem       Date:  2021-01-29       Impact factor: 5.221

6.  Oxoanion Imprinting Combining Cationic and Urea Binding Groups: A Potent Glyphosate Adsorber.

Authors:  Sudhirkumar Shinde; Mona Mansour; Liliia Mavliutova; Anil Incel; Celina Wierzbicka; Hussein I Abdel-Shafy; Börje Sellergren
Journal:  ACS Omega       Date:  2021-12-27

7.  Epitope-imprinted polymers: Design principles of synthetic binding partners for natural biomacromolecules.

Authors:  Simão P B Teixeira; Rui L Reis; Nicholas A Peppas; Manuela E Gomes; Rui M A Domingues
Journal:  Sci Adv       Date:  2021-10-29       Impact factor: 14.136

8.  Combinatorial design of a sialic acid imprinted binding site exploring a dual ion receptor approach.

Authors:  Liliia Mavliutova; Elena Verduci; Börje Sellergren
Journal:  RSC Adv       Date:  2021-10-22       Impact factor: 4.036

Review 9.  Molecularly imprinted polymers by epitope imprinting: a journey from molecular interactions to the available bioinformatics resources to scout for epitope templates.

Authors:  Laura Pasquardini; Alessandra Maria Bossi
Journal:  Anal Bioanal Chem       Date:  2021-05-20       Impact factor: 4.142

Review 10.  [Advances in enrichment of phosphorylated peptides and glycopeptides by smart polymer-based materials].

Authors:  Xintong Zheng; Xue Wang; Fusheng Zhang; Xuyang Zhang; Yanyan Zhao; Guangyan Qing
Journal:  Se Pu       Date:  2021-01
  10 in total

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