Literature DB >> 18839091

Methods for studying functional interactions among neuronal populations.

Nandakumar S Narayanan1, Mark Laubach.   

Abstract

How do populations of neurons work together to control behavior? To study this issue, our group simultaneously records from populations of neurons across multiple electrodes in multiple brain regions during operant behavior. Here, we describe methods for quantifying the relationship between neuronal population activity and performance of operant behavioral tasks. We describe statistical techniques, based on time- and trial-shuffling, that can establish the significance of correlations between multiple and simultaneously recorded spike trains. Then, we describe several approaches to studying functional interactions between neurons, including principal component analysis, cross-correlation analysis, analyses of rate correlations, and analyses of shared predictive information. Finally, we compare these techniques using a sample data set and discuss how the combined use of these techniques can lead to novel insights regarding neuronal interactions during behavior.

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Year:  2009        PMID: 18839091      PMCID: PMC3856913          DOI: 10.1007/978-1-59745-543-5_7

Source DB:  PubMed          Journal:  Methods Mol Biol        ISSN: 1064-3745


  36 in total

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Authors:  Elad Schneidman; William Bialek; Michael J Berry
Journal:  J Neurosci       Date:  2003-12-17       Impact factor: 6.167

3.  Neural noise and movement-related codes in the macaque supplementary motor area.

Authors:  Bruno B Averbeck; Daeyeol Lee
Journal:  J Neurosci       Date:  2003-08-20       Impact factor: 6.167

4.  Top-down control of motor cortex ensembles by dorsomedial prefrontal cortex.

Authors:  Nandakumar S Narayanan; Mark Laubach
Journal:  Neuron       Date:  2006-12-07       Impact factor: 17.173

5.  Slow covariations in neuronal resting potentials can lead to artefactually fast cross-correlations in their spike trains.

Authors:  C D Brody
Journal:  J Neurophysiol       Date:  1998-12       Impact factor: 2.714

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Journal:  Exp Brain Res       Date:  1997-03       Impact factor: 1.972

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9.  Dynamics of neuronal interactions in monkey cortex in relation to behavioural events.

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Journal:  Nature       Date:  1995-02-09       Impact factor: 49.962

10.  Evaluation of neuronal connectivity: sensitivity of cross-correlation.

Authors:  A M Aertsen; G L Gerstein
Journal:  Brain Res       Date:  1985-08-12       Impact factor: 3.252

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  31 in total

1.  Delay activity in rodent frontal cortex during a simple reaction time task.

Authors:  Nandakumar S Narayanan; Mark Laubach
Journal:  J Neurophysiol       Date:  2009-04-01       Impact factor: 2.714

2.  Role of mPFC and nucleus accumbens circuitry in modulation of a nicotine plus alcohol compound drug state.

Authors:  Patrick A Randall; Zoe A McElligott; Joyce Besheer
Journal:  Addict Biol       Date:  2019-06-07       Impact factor: 4.280

3.  D1-dependent 4 Hz oscillations and ramping activity in rodent medial frontal cortex during interval timing.

Authors:  Krystal L Parker; Kuan-Hua Chen; Johnathan R Kingyon; James F Cavanagh; Nandakumar S Narayanan
Journal:  J Neurosci       Date:  2014-12-10       Impact factor: 6.167

4.  Brain activity mapping at multiple scales with silicon microprobes containing 1,024 electrodes.

Authors:  Justin L Shobe; Leslie D Claar; Sepideh Parhami; Konstantin I Bakhurin; Sotiris C Masmanidis
Journal:  J Neurophysiol       Date:  2015-07-01       Impact factor: 2.714

5.  Prefrontal D1 dopamine signaling is required for temporal control.

Authors:  Nandakumar S Narayanan; Benjamin B Land; John E Solder; Karl Deisseroth; Ralph J DiLeone
Journal:  Proc Natl Acad Sci U S A       Date:  2012-11-26       Impact factor: 11.205

6.  Encoding and tracking of outcome-specific expectancy in the gustatory cortex of alert rats.

Authors:  Matthew P H Gardner; Alfredo Fontanini
Journal:  J Neurosci       Date:  2014-09-24       Impact factor: 6.167

7.  A semiparametric Bayesian model for detecting synchrony among multiple neurons.

Authors:  Babak Shahbaba; Bo Zhou; Shiwei Lan; Hernando Ombao; David Moorman; Sam Behseta
Journal:  Neural Comput       Date:  2014-06-12       Impact factor: 2.026

8.  Spatial Structure of Synchronized Inhibition in the Olfactory Bulb.

Authors:  Hannah A Arnson; Ben W Strowbridge
Journal:  J Neurosci       Date:  2017-09-25       Impact factor: 6.167

9.  Submillisecond firing synchrony between different subtypes of cortical interneurons connected chemically but not electrically.

Authors:  Hang Hu; Yunyong Ma; Ariel Agmon
Journal:  J Neurosci       Date:  2011-03-02       Impact factor: 6.167

Review 10.  Metabolic hormones, dopamine circuits, and feeding.

Authors:  Nandakumar S Narayanan; Douglas J Guarnieri; Ralph J DiLeone
Journal:  Front Neuroendocrinol       Date:  2009-10-28       Impact factor: 8.606

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