Literature DB >> 18815091

Restoration of DWI data using a Rician LMMSE estimator.

Santiago Aja-Fernandez1, Marc Niethammer, Marek Kubicki, Martha E Shenton, Carl-Fredrik Westin.   

Abstract

This paper introduces and analyzes a linear minimum mean square error (LMMSE) estimator using a Rician noise model and its recursive version (RLMMSE) for the restoration of diffusion weighted images. A method to estimate the noise level based on local estimations of mean or variance is used to automatically parametrize the estimator. The restoration performance is evaluated using quality indexes and compared to alternative estimation schemes. The overall scheme is simple, robust, fast, and improves estimations. Filtering diffusion weighted magnetic resonance imaging (DW-MRI) with the proposed methodology leads to more accurate tensor estimations. Real and synthetic datasets are analyzed.

Entities:  

Mesh:

Year:  2008        PMID: 18815091      PMCID: PMC2756835          DOI: 10.1109/TMI.2008.920609

Source DB:  PubMed          Journal:  IEEE Trans Med Imaging        ISSN: 0278-0062            Impact factor:   10.048


  25 in total

Review 1.  Processing and visualization for diffusion tensor MRI.

Authors:  C-F Westin; S E Maier; H Mamata; A Nabavi; F A Jolesz; R Kikinis
Journal:  Med Image Anal       Date:  2002-06       Impact factor: 8.545

2.  A versatile wavelet domain noise filtration technique for medical imaging.

Authors:  Aleksandra Pizurica; Wilfried Philips; Ignace Lemahieu; Marc Acheroy
Journal:  IEEE Trans Med Imaging       Date:  2003-03       Impact factor: 10.048

3.  Image quality assessment: from error visibility to structural similarity.

Authors:  Zhou Wang; Alan Conrad Bovik; Hamid Rahim Sheikh; Eero P Simoncelli
Journal:  IEEE Trans Image Process       Date:  2004-04       Impact factor: 10.856

4.  Sequential anisotropic Wiener filtering applied to 3D MRI data.

Authors:  Marcos Martin-Fernandez; Carlos Alberola-Lopez; Juan Ruiz-Alzola; Carl-Fredrik Westin
Journal:  Magn Reson Imaging       Date:  2006-12-19       Impact factor: 2.546

5.  Signal LMMSE estimation from multiple samples in MRI and DT-MRI.

Authors:  S Aja-Fernández; C Alberola-López; C F Westin
Journal:  Med Image Comput Comput Assist Interv       Date:  2007

6.  Image quality assessment based on local variance.

Authors:  Santiago Aja-Fernández; Raúl San José Estépar; Carlos Alberola-López; Carl-Fredrik Westin
Journal:  Conf Proc IEEE Eng Med Biol Soc       Date:  2006

7.  Wavelet-based Rician noise removal for magnetic resonance imaging.

Authors:  R D Nowak
Journal:  IEEE Trans Image Process       Date:  1999       Impact factor: 10.856

8.  Noise and signal estimation in magnitude MRI and Rician distributed images: a LMMSE approach.

Authors:  Santiago Aja-Fernandez; Carlos Alberola-Lopez; Carl-Fredrik Westin
Journal:  IEEE Trans Image Process       Date:  2008-08       Impact factor: 10.856

9.  Maximum-likelihood estimation of Rician distribution parameters.

Authors:  J Sijbers; A J den Dekker; P Scheunders; D Van Dyck
Journal:  IEEE Trans Med Imaging       Date:  1998-06       Impact factor: 10.048

10.  Estimation of the noise in magnitude MR images.

Authors:  J Sijbers; A J den Dekker; J Van Audekerke; M Verhoye; D Van Dyck
Journal:  Magn Reson Imaging       Date:  1998       Impact factor: 2.546

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  37 in total

1.  Statistical analysis of fiber bundles using multi-tensor tractography: application to first-episode schizophrenia.

Authors:  Yogesh Rathi; Marek Kubicki; Sylvain Bouix; Carl-Fredrik Westin; Jill Goldstein; Larry Seidman; Raquelle Mesholam-Gately; Robert W McCarley; Martha E Shenton
Journal:  Magn Reson Imaging       Date:  2011-01-31       Impact factor: 2.546

2.  Optimal real-time estimation in diffusion tensor imaging.

Authors:  Pablo Casaseca-de-la-Higuera; Antonio Tristán-Vega; Santiago Aja-Fernández; Carlos Alberola-López; Carl-Fredrik Westin; Raúl San José Estépar
Journal:  Magn Reson Imaging       Date:  2012-02-02       Impact factor: 2.546

3.  Diffusion tensor imaging and diffusion modeling: Application to monitoring changes in the medial gastrocnemius in disuse atrophy induced by unilateral limb suspension.

Authors:  Vadim Malis; Usha Sinha; Robert Csapo; Marco Narici; Edward Smitaman; Shantanu Sinha
Journal:  J Magn Reson Imaging       Date:  2018-12-19       Impact factor: 4.813

4.  White matter tract abnormalities between rostral middle frontal gyrus, inferior frontal gyrus and striatum in first-episode schizophrenia.

Authors:  Meina Quan; Sang-Hyuk Lee; Marek Kubicki; Zora Kikinis; Yogesh Rathi; Larry J Seidman; Raquelle I Mesholam-Gately; Jill M Goldstein; Robert W McCarley; Martha E Shenton; James J Levitt
Journal:  Schizophr Res       Date:  2013-02-13       Impact factor: 4.939

5.  Improved diffusion imaging through SNR-enhancing joint reconstruction.

Authors:  Justin P Haldar; Van J Wedeen; Marzieh Nezamzadeh; Guangping Dai; Michael W Weiner; Norbert Schuff; Zhi-Pei Liang
Journal:  Magn Reson Med       Date:  2012-03-05       Impact factor: 4.668

6.  Demonstration of nonlinearity bias in the measurement of the apparent diffusion coefficient in multicenter trials.

Authors:  Dariya I Malyarenko; David Newitt; Lisa J Wilmes; Alina Tudorica; Karl G Helmer; Lori R Arlinghaus; Michael A Jacobs; Guido Jajamovich; Bachir Taouli; Thomas E Yankeelov; Wei Huang; Thomas L Chenevert
Journal:  Magn Reson Med       Date:  2015-05-02       Impact factor: 4.668

7.  Multiple-echo diffusion tensor acquisition technique (MEDITATE) on a 3T clinical scanner.

Authors:  Steven H Baete; Gene Cho; Eric E Sigmund
Journal:  NMR Biomed       Date:  2013-07-05       Impact factor: 4.044

8.  A fast algorithm for denoising magnitude diffusion-weighted images with rank and edge constraints.

Authors:  Fan Lam; Ding Liu; Zhuang Song; Norbert Schuff; Zhi-Pei Liang
Journal:  Magn Reson Med       Date:  2015-03-02       Impact factor: 4.668

9.  Human middle longitudinal fascicle: segregation and behavioral-clinical implications of two distinct fiber connections linking temporal pole and superior temporal gyrus with the angular gyrus or superior parietal lobule using multi-tensor tractography.

Authors:  N Makris; M G Preti; D Wassermann; Y Rathi; G M Papadimitriou; C Yergatian; B C Dickerson; M E Shenton; M Kubicki
Journal:  Brain Imaging Behav       Date:  2013-09       Impact factor: 3.978

Review 10.  Skeletal muscle diffusion tensor-MRI fiber tracking: rationale, data acquisition and analysis methods, applications and future directions.

Authors:  Bruce M Damon; Martijn Froeling; Amanda K W Buck; Jos Oudeman; Zhaohua Ding; Aart J Nederveen; Emily C Bush; Gustav J Strijkers
Journal:  NMR Biomed       Date:  2016-06-03       Impact factor: 4.044

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