Literature DB >> 18814170

Towards a quantitative understanding of protein hydration and volumetric properties.

Lally Mitra1, Jean-Baptiste Rouget, Bertrand Garcia-Moreno, Catherine A Royer, Roland Winter.   

Abstract

Herein, we probe by pressure perturbation calorimetry (PPC) the coefficient of thermal expansion, the volumetric and the hydration properties of variants of a hyperstable variant of staphylococcal nuclease (SNase), Delta+PHS. The temperature-dependent volumetric properties of the folded and unfolded states of the wild-type protein are calculated with previously published data. The present PPC results are used to interpret the volume diagram and expansivity at a molecular level. We conclude that the expansivity of the unfolded state is, to a first approximation, temperature independent, while that of the folded state decreases with increasing temperature. Our data suggest that at low temperature the defining contribution to DeltaV comes mainly from excluded volume differences and DeltaV for unfolding is negative. In contrast, at high temperatures, differential solvation due to the increased exposed surface area of the unfolded state and, in particular, its larger thermal volume linked to the increased conformational dynamics of the unfolded state ensemble takes over and DeltaV for unfolding eventually becomes positive.

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Year:  2008        PMID: 18814170     DOI: 10.1002/cphc.200800405

Source DB:  PubMed          Journal:  Chemphyschem        ISSN: 1439-4235            Impact factor:   3.102


  14 in total

1.  Unique features of the folding landscape of a repeat protein revealed by pressure perturbation.

Authors:  Jean-Baptiste Rouget; Martin A Schroer; Christoph Jeworrek; Matthias Pühse; Jean-Louis Saldana; Yannick Bessin; Metin Tolan; Doug Barrick; Roland Winter; Catherine A Royer
Journal:  Biophys J       Date:  2010-06-02       Impact factor: 4.033

2.  High-pressure SAXS study of folded and unfolded ensembles of proteins.

Authors:  Martin A Schroer; Michael Paulus; Christoph Jeworrek; Christina Krywka; Saskia Schmacke; Yong Zhai; D C Florian Wieland; Christoph J Sahle; Michael Chimenti; Catherine A Royer; Bertrand Garcia-Moreno; Metin Tolan; Roland Winter
Journal:  Biophys J       Date:  2010-11-17       Impact factor: 4.033

3.  Putting the Piezolyte Hypothesis under Pressure.

Authors:  Christina M Papini; Pranav P Pandharipande; Catherine A Royer; George I Makhatadze
Journal:  Biophys J       Date:  2017-08-10       Impact factor: 4.033

Review 4.  Lessons from pressure denaturation of proteins.

Authors:  Julien Roche; Catherine A Royer
Journal:  J R Soc Interface       Date:  2018-10-03       Impact factor: 4.118

5.  Volume of Hsp90 ligand binding and the unfolding phase diagram as a function of pressure and temperature.

Authors:  Vytautas Petrauskas; Joana Gylytė; Zigmantas Toleikis; Piotras Cimmperman; Daumantas Matulis
Journal:  Eur Biophys J       Date:  2013-01-05       Impact factor: 1.733

6.  Size and sequence and the volume change of protein folding.

Authors:  Jean-Baptiste Rouget; Tural Aksel; Julien Roche; Jean-Louis Saldana; Angel E Garcia; Doug Barrick; Catherine A Royer
Journal:  J Am Chem Soc       Date:  2011-03-29       Impact factor: 15.419

7.  Exploring the effects of cosolutes and crowding on the volumetric and kinetic profile of the conformational dynamics of a poly dA loop DNA hairpin: a single-molecule FRET study.

Authors:  Satyajit Patra; Vitor Schuabb; Irena Kiesel; Jim-Marcel Knop; Rosario Oliva; Roland Winter
Journal:  Nucleic Acids Res       Date:  2019-01-25       Impact factor: 16.971

8.  Pressure perturbation calorimetry of lipoproteins reveals an endothermic transition without detectable volume changes. Implications for adsorption of apolipoprotein to a phospholipid surface.

Authors:  Shobini Jayaraman; Ravi Jasuja; Mikhail N Zakharov; Olga Gursky
Journal:  Biochemistry       Date:  2011-04-20       Impact factor: 3.162

9.  Structural plasticity of staphylococcal nuclease probed by perturbation with pressure and pH.

Authors:  Ryo Kitahara; Kazumi Hata; Akihiro Maeno; Kazuyuki Akasaka; Michael S Chimenti; Bertrand Garcia-Moreno E; Martin A Schroer; Christoph Jeworrek; Metin Tolan; Roland Winter; Julien Roche; Christian Roumestand; Karine Montet de Guillen; Catherine A Royer
Journal:  Proteins       Date:  2011-01-20

10.  Pressure perturbation calorimetry of apolipoproteins in solution and in model lipoproteins.

Authors:  Sangeeta Benjwal; Olga Gursky
Journal:  Proteins       Date:  2010-04
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