Literature DB >> 188137

Defined dimensional changes in enzyme cofactors: fluorescent "stretched-out" analogs of adenine nucleotides.

D I Scopes, J R Barrio, N J Leonard.   

Abstract

A concept is presented for testing the dimensional restrictions of enzyme-active sites by stretching the substrate or cofactor by known magnitude. These restrictions of enzyme-active sites specific for purine cofactors were tested by the synthesis and evaluation of lin-benzoadenosine 5'-triphosphate, 5'-diphosphate, and 3',5'-monophosphate with respect to enzyme binding and activity. These "stretchedout" (by 2.4 angstroms) versions of the adenine ribonucleotides bind strongly, slow the enzymatic rates, and have useful fluorescence properties.

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Year:  1977        PMID: 188137     DOI: 10.1126/science.188137

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  15 in total

1.  Toward a designed, functioning genetic system with expanded-size base pairs: solution structure of the eight-base xDNA double helix.

Authors:  Stephen R Lynch; Haibo Liu; Jianmin Gao; Eric T Kool
Journal:  J Am Chem Soc       Date:  2006-11-15       Impact factor: 15.419

2.  Synthesis and properties of size-expanded DNAs: toward designed, functional genetic systems.

Authors:  Andrew T Krueger; Haige Lu; Alex H F Lee; Eric T Kool
Journal:  Acc Chem Res       Date:  2007-02       Impact factor: 22.384

3.  Polymerase amplification, cloning, and gene expression of benzo-homologous "yDNA" base pairs.

Authors:  Jijumon Chelliserrykattil; Haige Lu; Alex H F Lee; Eric T Kool
Journal:  Chembiochem       Date:  2008-12-15       Impact factor: 3.164

Review 4.  Fluorescent analogs of biomolecular building blocks: design, properties, and applications.

Authors:  Renatus W Sinkeldam; Nicholas J Greco; Yitzhak Tor
Journal:  Chem Rev       Date:  2010-05-12       Impact factor: 60.622

Review 5.  DNA-multichromophore systems.

Authors:  Yin Nah Teo; Eric T Kool
Journal:  Chem Rev       Date:  2012-03-16       Impact factor: 60.622

6.  Synthesis of fluorescent nucleotide analogues: 5'-mono-, di-, and triphosphates of linear-benzoguanosine, linear-benzoinosine, and linear-benzoxanthosine.

Authors:  N J Leonard; G E Keyser
Journal:  Proc Natl Acad Sci U S A       Date:  1979-09       Impact factor: 11.205

7.  Synthesis and biological activity of a profluorescent analogue of coenzyme B12.

Authors:  M S Rosendahl; G M Omann; N J Leonard
Journal:  Proc Natl Acad Sci U S A       Date:  1982-06       Impact factor: 11.205

8.  Spectroscopic sensitivity of linear-benzoadenine nucleotides to divalent metal counterions, side chain conformations, micelles, and enzymes.

Authors:  P Vanderlijn; J R Barrio; N J Leonard
Journal:  Proc Natl Acad Sci U S A       Date:  1978-09       Impact factor: 11.205

9.  Efficient replication bypass of size-expanded DNA base pairs in bacterial cells.

Authors:  James C Delaney; Jianmin Gao; Haibo Liu; Nidhi Shrivastav; John M Essigmann; Eric T Kool
Journal:  Angew Chem Int Ed Engl       Date:  2009       Impact factor: 15.336

10.  lin-Benzo-ATP and-ADP: Versatile fluorescent probes for spectroscopic and biochemical studies.

Authors:  E Grell; E Lewitzki; C Bremer; S Kramer-Schmitt; J Weber; A E Senior
Journal:  J Fluoresc       Date:  1994-09       Impact factor: 2.217

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