Literature DB >> 18797191

Genetic selection of activatory mutations in KcsA.

Jennifer J Paynter1, Peter Sarkies, Isabelle Andres-Enguix, Stephen J Tucker.   

Abstract

The KcsA potassium channel from Streptomyces lividans is one of the most actively studied ion channels. However, there are still unresolved issues about its gating mechanism in vivo because the channel is only activated by highly acidic intracellular pH, meaning that it will be mostly inactive in its host environment. In this study we have used a genetic complementation assay of K+-auxotrophic E. coli (TK2420) and S. cerevisiae (SGY1528) to identify activatory or 'gain-of-function' mutations which allow functional activity of KcsA in the physiological environment of two markedly different expression systems. These mutations clustered at the helix-bundle-crossing in both TM1 and TM2 (residues H25, L105, A108, T112, W113, F114, E118 and Q119), and include residues previously implicated in the pH-gating mechanism. We discuss how these gain-of-function mutations may result in their activatory phenotype, the relative merits of the E. coli and S. cerevisiae genetic complementation approaches for the identification of gating mutations in prokaryotic K+ channels, and ways in which this assay may be improved for future use in screening protocols.

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Year:  2008        PMID: 18797191      PMCID: PMC2688072          DOI: 10.4161/chan.2.6.6874

Source DB:  PubMed          Journal:  Channels (Austin)        ISSN: 1933-6950            Impact factor:   2.581


  35 in total

1.  Transmembrane structure of an inwardly rectifying potassium channel.

Authors:  D L Minor; S J Masseling; Y N Jan; L Y Jan
Journal:  Cell       Date:  1999-03-19       Impact factor: 41.582

2.  Electrostatic tuning of ion conductance in potassium channels.

Authors:  Crina M Nimigean; Joshua S Chappie; Christopher Miller
Journal:  Biochemistry       Date:  2003-08-12       Impact factor: 3.162

3.  In silico activation of KcsA K+ channel by lateral forces applied to the C-termini of inner helices.

Authors:  Denis B Tikhonov; Boris S Zhorov
Journal:  Biophys J       Date:  2004-09       Impact factor: 4.033

4.  Streptomyces lividans potassium channel KcsA is regulated by the potassium electrochemical gradient.

Authors:  E Zakharian; R N Reusch
Journal:  Biochem Biophys Res Commun       Date:  2004-04-02       Impact factor: 3.575

5.  Evolving potassium channels by means of yeast selection reveals structural elements important for selectivity.

Authors:  Delphine Bichet; Yu-Fung Lin; Christian A Ibarra; Cindy Shen Huang; B Alexander Yi; Yuh Nung Jan; Lily Yeh Jan
Journal:  Proc Natl Acad Sci U S A       Date:  2004-03-22       Impact factor: 11.205

6.  Fluorescence dye as monitor of internal pH in Escherichia coli cells.

Authors:  E Shechter; L Letellier; E R Simons
Journal:  FEBS Lett       Date:  1982-03-08       Impact factor: 4.124

7.  Expression of the Saccharomyces cerevisiae PIS gene and synthesis of phosphatidylinositol in Escherichia coli.

Authors:  J Nikawa; T Kodaki; S Yamashita
Journal:  J Bacteriol       Date:  1988-10       Impact factor: 3.490

8.  Compilation and comparison of the sequence context around the AUG startcodons in Saccharomyces cerevisiae mRNAs.

Authors:  R Hamilton; C K Watanabe; H A de Boer
Journal:  Nucleic Acids Res       Date:  1987-04-24       Impact factor: 16.971

9.  Measurement of yeast intracellular pH by image processing and the change it undergoes during growth phase.

Authors:  T Imai; T Ohno
Journal:  J Biotechnol       Date:  1995-01-15       Impact factor: 3.307

Review 10.  The roles and regulation of potassium in bacteria.

Authors:  Wolfgang Epstein
Journal:  Prog Nucleic Acid Res Mol Biol       Date:  2003
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  12 in total

1.  Random mutagenesis screening indicates the absence of a separate H(+)-sensor in the pH-sensitive Kir channels.

Authors:  Jennifer J Paynter; Lijun Shang; Murali K Bollepalli; Thomas Baukrowitz; Stephen J Tucker
Journal:  Channels (Austin)       Date:  2010-09-01       Impact factor: 2.581

2.  Genetic screen for potassium leaky small mechanosensitive channels (MscS) in Escherichia coli: recognition of cytoplasmic β domain as a new gating element.

Authors:  Piotr Koprowski; Wojciech Grajkowski; Ehud Y Isacoff; Andrzej Kubalski
Journal:  J Biol Chem       Date:  2010-10-26       Impact factor: 5.157

3.  Design and characterization of a constitutively open KcsA.

Authors:  Luis G Cuello; Vishwanath Jogini; D Marien Cortes; Amornrat Sompornpisut; Michael D Purdy; Michael C Wiener; Eduardo Perozo
Journal:  FEBS Lett       Date:  2010-02-12       Impact factor: 4.124

4.  A molecular mechanism for proton-dependent gating in KcsA.

Authors:  Luis G Cuello; D Marien Cortes; Vishwanath Jogini; Amornrat Sompornpisut; Eduardo Perozo
Journal:  FEBS Lett       Date:  2010-02-06       Impact factor: 4.124

5.  Using yeast to study potassium channel function and interactions with small molecules.

Authors:  Sviatoslav N Bagriantsev; Daniel L Minor
Journal:  Methods Mol Biol       Date:  2013

Review 6.  Searching for interesting channels: pairing selection and molecular evolution methods to study ion channel structure and function.

Authors:  Daniel L Minor
Journal:  Mol Biosyst       Date:  2009-06-19

Review 7.  Investigating Potassium Channels in Budding Yeast: A Genetic Sandbox.

Authors:  Timothy D Mackie; Jeffrey L Brodsky
Journal:  Genetics       Date:  2018-07       Impact factor: 4.562

8.  Probing the energy landscape of activation gating of the bacterial potassium channel KcsA.

Authors:  Tobias Linder; Bert L de Groot; Anna Stary-Weinzinger
Journal:  PLoS Comput Biol       Date:  2013-05-02       Impact factor: 4.779

9.  Timothy mutation disrupts the link between activation and inactivation in Ca(V)1.2 protein.

Authors:  Katrin Depil; Stanislav Beyl; Anna Stary-Weinzinger; Annette Hohaus; Eugen Timin; Steffen Hering
Journal:  J Biol Chem       Date:  2011-06-17       Impact factor: 5.157

10.  Functional complementation and genetic deletion studies of KirBac channels: activatory mutations highlight gating-sensitive domains.

Authors:  Jennifer J Paynter; Isabelle Andres-Enguix; Philip W Fowler; Stephen Tottey; Wayland Cheng; Decha Enkvetchakul; Vassiliy N Bavro; Yoshio Kusakabe; Mark S P Sansom; Nigel J Robinson; Colin G Nichols; Stephen J Tucker
Journal:  J Biol Chem       Date:  2010-09-28       Impact factor: 5.157

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