Literature DB >> 18791019

Soil formate regulates the fungal nitrous oxide emission pathway.

W K Ma1, R E Farrell, S D Siciliano.   

Abstract

Fungal activity is a major driver in the global nitrogen cycle, and mounting evidence suggests that fungal denitrification activity contributes significantly to soil emissions of the greenhouse gas nitrous oxide (N(2)O). The metabolic pathway and oxygen requirement for fungal denitrification are different from those for bacterial denitrification. We hypothesized that the soil N(2)O emission from fungi is formate and O(2) dependent and that land use and landforms could influence the proportion of N(2)O coming from fungi. Using substrate-induced respiration inhibition under anaerobic and aerobic conditions in combination with (15)N gas analysis, we found that formate and hypoxia (versus anaerobiosis) were essential for the fungal reduction of (15)N-labeled nitrate to (15)N(2)O. As much as 65% of soil-emitted N(2)O was attributable to fungi; however, this was found only in soils from water-accumulating landforms. From these results, we hypothesize that plant root exudates could affect N(2)O production from fungi via the proposed formate-dependent pathway.

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Year:  2008        PMID: 18791019      PMCID: PMC2576722          DOI: 10.1128/AEM.00797-08

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  19 in total

1.  Oxygen requirement for denitrification by the fungus Fusarium oxysporum.

Authors:  Z Zhou; N Takaya; M A Sakairi; H Shoun
Journal:  Arch Microbiol       Date:  2001-01       Impact factor: 2.552

2.  In situ stimulation of groundwater denitrification with formate to remediate nitrate contamination.

Authors:  R L Smith; D N Miller; M H Brooks; M A Widdowson; M W Killingstad
Journal:  Environ Sci Technol       Date:  2001-01-01       Impact factor: 9.028

3.  Identification of heterotrophic nitrification in a sierran forest soil.

Authors:  J P Schimel; M K Firestone; K S Killham
Journal:  Appl Environ Microbiol       Date:  1984-10       Impact factor: 4.792

4.  Autotrophic, hydrogen-oxidizing, denitrifying bacteria in groundwater, potential agents for bioremediation of nitrate contamination.

Authors:  R L Smith; M L Ceazan; M H Brooks
Journal:  Appl Environ Microbiol       Date:  1994-06       Impact factor: 4.792

5.  Ammonia fermentation, a novel anoxic metabolism of nitrate by fungi.

Authors:  Zhemin Zhou; Naoki Takaya; Akira Nakamura; Masashi Yamaguchi; Kanji Takeo; Hirofumi Shoun
Journal:  J Biol Chem       Date:  2001-11-16       Impact factor: 5.157

Review 6.  Cell biology and molecular basis of denitrification.

Authors:  W G Zumft
Journal:  Microbiol Mol Biol Rev       Date:  1997-12       Impact factor: 11.056

7.  Nitrate reductase-formate dehydrogenase couple involved in the fungal denitrification by Fusarium oxysporum.

Authors:  Hiromasa Uchimura; Hitoshi Enjoji; Takafumi Seki; Ayako Taguchi; Naoki Takaya; Hirofumi Shoun
Journal:  J Biochem       Date:  2002-04       Impact factor: 3.387

8.  Using nitrogen-15 to quantify vegetative buffer effectiveness for sequestering nitrogen in runoff.

Authors:  A Bedard-Haughn; K W Tate; C van Kessel
Journal:  J Environ Qual       Date:  2004 Nov-Dec       Impact factor: 2.751

9.  Denitrification of nitrate by the fungus Cylindrocarpon tonkinense.

Authors:  Tomo-o Watsuji; Naoki Takaya; Akira Nakamura; Hirofumi Shoun
Journal:  Biosci Biotechnol Biochem       Date:  2003-05       Impact factor: 2.043

10.  Formate-forming fungal catabolic pathway to supply electrons to nitrate respiration.

Authors:  Seigo Kuwazaki; Naoki Takaya; Akira Nakamura; Hirofumi Shoun
Journal:  Biosci Biotechnol Biochem       Date:  2003-04       Impact factor: 2.043

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  5 in total

Review 1.  Fungal denitrification and nitric oxide reductase cytochrome P450nor.

Authors:  Hirofumi Shoun; Shinya Fushinobu; Li Jiang; Sang-Wan Kim; Takayoshi Wakagi
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2012-05-05       Impact factor: 6.237

Review 2.  Microbial cytochromes P450: biodiversity and biotechnology. Where do cytochromes P450 come from, what do they do and what can they do for us?

Authors:  Steven L Kelly; Diane E Kelly
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2013-01-06       Impact factor: 6.237

3.  Detection and Diversity of Fungal Nitric Oxide Reductase Genes (p450nor) in Agricultural Soils.

Authors:  Steven A Higgins; Allana Welsh; Luis H Orellana; Konstantinos T Konstantinidis; Joanne C Chee-Sanford; Robert A Sanford; Christopher W Schadt; Frank E Löffler
Journal:  Appl Environ Microbiol       Date:  2016-05-02       Impact factor: 4.792

4.  Comparison of Deep-Sea Picoeukaryotic Composition Estimated from the V4 and V9 Regions of 18S rRNA Gene with a Focus on the Hadal Zone of the Mariana Trench.

Authors:  Yuye Han; Cui Guo; Xuran Guan; Andrew McMinn; Lu Liu; Guiliang Zheng; Yong Jiang; Yantao Liang; Hongbing Shao; Jiwei Tian; Min Wang
Journal:  Microb Ecol       Date:  2021-04-03       Impact factor: 4.552

5.  Impact of nitrogen compounds on fungal and bacterial contributions to codenitrification in a pasture soil.

Authors:  David Rex; Timothy J Clough; Karl G Richards; Leo M Condron; Cecile A M de Klein; Sergio E Morales; Gary J Lanigan
Journal:  Sci Rep       Date:  2019-09-16       Impact factor: 4.379

  5 in total

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