Literature DB >> 22451104

Fungal denitrification and nitric oxide reductase cytochrome P450nor.

Hirofumi Shoun1, Shinya Fushinobu, Li Jiang, Sang-Wan Kim, Takayoshi Wakagi.   

Abstract

We have shown that many fungi (eukaryotes) exhibit distinct denitrifying activities, although occurrence of denitrification was previously thought to be restricted to bacteria (prokaryotes), and have characterized the fungal denitrification system. It comprises NirK (copper-containing nitrite reductase) and P450nor (a cytochrome P450 nitric oxide (NO) reductase (Nor)) to reduce nitrite to nitrous oxide (N(2)O). The system is localized in mitochondria functioning during anaerobic respiration. Some fungal systems further contain and use dissimilatory and assimilatory nitrate reductases to denitrify nitrate. Phylogenetic analysis of nirK genes showed that the fungal-denitrifying system has the same ancestor as the bacterial counterpart and suggested a possibility of its proto-mitochondrial origin. By contrast, fungi that have acquired a P450 from bacteria by horizontal transfer of the gene, modulated its function to give a Nor activity replacing the original Nor with P450nor. P450nor receives electrons directly from nicotinamide adenine dinucleotide to reduce NO to N(2)O. The mechanism of this unprecedented electron transfer has been extensively studied and thoroughly elucidated. Fungal denitrification is often accompanied by a unique phenomenon, co-denitrification, in which a hybrid N(2) or N(2)O species is formed upon the combination of nitrogen atoms of nitrite with a nitrogen donor (amines and imines). Possible involvement of NirK and P450nor is suggested.

Entities:  

Mesh:

Substances:

Year:  2012        PMID: 22451104      PMCID: PMC3306627          DOI: 10.1098/rstb.2011.0335

Source DB:  PubMed          Journal:  Philos Trans R Soc Lond B Biol Sci        ISSN: 0962-8436            Impact factor:   6.237


  46 in total

1.  A positively charged cluster formed in the heme-distal pocket of cytochrome P450nor is essential for interaction with NADH.

Authors:  T Kudo; N Takaya; S Y Park; Y Shiro; H Shoun
Journal:  J Biol Chem       Date:  2000-11-13       Impact factor: 5.157

Review 2.  Mitochondria as we don't know them.

Authors:  Aloysius G M Tielens; Carmen Rotte; Jaap J van Hellemond; William Martin
Journal:  Trends Biochem Sci       Date:  2002-11       Impact factor: 13.807

3.  Crystal structure of nitric oxide reductase from denitrifying fungus Fusarium oxysporum.

Authors:  S Y Park; H Shimizu; S Adachi; A Nakagawa; I Tanaka; K Nakahara; H Shoun; E Obayashi; H Nakamura; T Iizuka; Y Shiro
Journal:  Nat Struct Biol       Date:  1997-10

4.  Soluble, nitrate/nitrite-inducible cytochrome P-450 of the fungus, Fusarium oxysporum.

Authors:  H Shoun; W Suyama; T Yasui
Journal:  FEBS Lett       Date:  1989-02-13       Impact factor: 4.124

5.  Denitrification by the fungus Fusarium oxysporum and involvement of cytochrome P-450 in the respiratory nitrite reduction.

Authors:  H Shoun; T Tanimoto
Journal:  J Biol Chem       Date:  1991-06-15       Impact factor: 5.157

6.  Nitrate reductase-formate dehydrogenase couple involved in the fungal denitrification by Fusarium oxysporum.

Authors:  Hiromasa Uchimura; Hitoshi Enjoji; Takafumi Seki; Ayako Taguchi; Naoki Takaya; Hirofumi Shoun
Journal:  J Biochem       Date:  2002-04       Impact factor: 3.387

7.  The B' helix determines cytochrome P450nor specificity for the electron donors NADH and NADPH.

Authors:  Li Zhang; Takashi Kudo; Naoki Takaya; Hirofumi Shoun
Journal:  J Biol Chem       Date:  2002-07-08       Impact factor: 5.157

8.  D88A mutant of cytochrome P450nor provides kinetic evidence for direct complex formation with electron donor NADH.

Authors:  Mariko Umemura; Fei Su; Naoki Takaya; Yoshitsugu Shiro; Hirofumi Shoun
Journal:  Eur J Biochem       Date:  2004-07

Review 9.  Nitrogen cycle enzymology.

Authors:  S J Ferguson
Journal:  Curr Opin Chem Biol       Date:  1998-04       Impact factor: 8.822

10.  Nitrous oxide-forming codenitrification catalyzed by cytochrome P450nor.

Authors:  Fei Su; Naoki Takaya; Hirofumi Shoun
Journal:  Biosci Biotechnol Biochem       Date:  2004-02       Impact factor: 2.043

View more
  38 in total

1.  Watershed-scale fungal community characterization along a pH gradient in a subsurface environment cocontaminated with uranium and nitrate.

Authors:  Puja Jasrotia; Stefan J Green; Andy Canion; Will A Overholt; Om Prakash; Denis Wafula; Daniela Hubbard; David B Watson; Christopher W Schadt; Scott C Brooks; Joel E Kostka
Journal:  Appl Environ Microbiol       Date:  2014-01-03       Impact factor: 4.792

Review 2.  Fungal traits that drive ecosystem dynamics on land.

Authors:  Kathleen K Treseder; Jay T Lennon
Journal:  Microbiol Mol Biol Rev       Date:  2015-06       Impact factor: 11.056

Review 3.  Enterosalivary nitrate metabolism and the microbiome: Intersection of microbial metabolism, nitric oxide and diet in cardiac and pulmonary vascular health.

Authors:  Carl D Koch; Mark T Gladwin; Bruce A Freeman; Jon O Lundberg; Eddie Weitzberg; Alison Morris
Journal:  Free Radic Biol Med       Date:  2016-12-16       Impact factor: 7.376

4.  Upon further analysis, neither cytochrome c554 from Nitrosomonas europaea nor its F156A variant display NO reductase activity, though both proteins bind nitric oxide reversibly.

Authors:  Jennifer M McGarry; A Andrew Pacheco
Journal:  J Biol Inorg Chem       Date:  2018-06-26       Impact factor: 3.358

Review 5.  Biological and Bioinspired Inorganic N-N Bond-Forming Reactions.

Authors:  Christina Ferousi; Sean H Majer; Ida M DiMucci; Kyle M Lancaster
Journal:  Chem Rev       Date:  2020-02-28       Impact factor: 60.622

Review 6.  Biological sources and sinks of nitrous oxide and strategies to mitigate emissions.

Authors:  Andrew J Thomson; Georgios Giannopoulos; Jules Pretty; Elizabeth M Baggs; David J Richardson
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2012-05-05       Impact factor: 6.237

7.  Detection and Diversity of Fungal Nitric Oxide Reductase Genes (p450nor) in Agricultural Soils.

Authors:  Steven A Higgins; Allana Welsh; Luis H Orellana; Konstantinos T Konstantinidis; Joanne C Chee-Sanford; Robert A Sanford; Christopher W Schadt; Frank E Löffler
Journal:  Appl Environ Microbiol       Date:  2016-05-02       Impact factor: 4.792

Review 8.  The microbial nitrogen-cycling network.

Authors:  Marcel M M Kuypers; Hannah K Marchant; Boran Kartal
Journal:  Nat Rev Microbiol       Date:  2018-02-05       Impact factor: 60.633

9.  Novel P450nor Gene Detection Assay Used To Characterize the Prevalence and Diversity of Soil Fungal Denitrifiers.

Authors:  Amy Novinscak; Claudia Goyer; Bernie J Zebarth; David L Burton; Martin H Chantigny; Martin Filion
Journal:  Appl Environ Microbiol       Date:  2016-07-15       Impact factor: 4.792

Review 10.  The dual function of flavodiiron proteins: oxygen and/or nitric oxide reductases.

Authors:  Célia V Romão; João B Vicente; Patrícia T Borges; Carlos Frazão; Miguel Teixeira
Journal:  J Biol Inorg Chem       Date:  2016-01-14       Impact factor: 3.358

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.