Literature DB >> 18791012

Subfunctionality of hydride transferases of the old yellow enzyme family of flavoproteins of Pseudomonas putida.

Pieter van Dillewijn1, Rolf-Michael Wittich, Antonio Caballero, Juan-Luis Ramos.   

Abstract

To investigate potential complementary activities of multiple enzymes belonging to the same family within a single microorganism, we chose a set of Old Yellow Enzyme (OYE) homologs of Pseudomonas putida. The physiological function of these enzymes is not well established; however, an activity associated with OYE family members from different microorganisms is their ability to reduce nitroaromatic compounds. Using an in silico approach, we identified six OYE homologs in P. putida KT2440. Each gene was subcloned into an expression vector, and each corresponding gene product was purified to homogeneity prior to in vitro analysis for its catalytic activity against 2,4,6-trinitrotoluene (TNT). One of the enzymes, called XenD, lacked in vitro activity, whereas the other five enzymes demonstrated type I hydride transferase activity and reduced the nitro groups of TNT to hydroxylaminodinitrotoluene derivatives. XenB has the additional ability to reduce the aromatic ring of TNT to produce Meisenheimer complexes, defined as type II hydride transferase activity. The condensations of the primary products of type I and type II hydride transferases react with each other to yield diarylamines and nitrite; the latter can be further reduced to ammonium and serves as a nitrogen source for microorganisms in vivo.

Entities:  

Mesh:

Substances:

Year:  2008        PMID: 18791012      PMCID: PMC2576699          DOI: 10.1128/AEM.00386-08

Source DB:  PubMed          Journal:  Appl Environ Microbiol        ISSN: 0099-2240            Impact factor:   4.792


  32 in total

1.  Structural mechanisms of QacR induction and multidrug recognition.

Authors:  M A Schumacher; M C Miller; S Grkovic; M H Brown; R A Skurray; R G Brennan
Journal:  Science       Date:  2001-12-07       Impact factor: 47.728

Review 2.  'New uses for an Old Enzyme'--the Old Yellow Enzyme family of flavoenzymes.

Authors:  Richard E Williams; Neil C Bruce
Journal:  Microbiology       Date:  2002-06       Impact factor: 2.777

3.  Transformation of 2,4,6-trinitrotoluene by purified xenobiotic reductase B from Pseudomonas fluorescens I-C.

Authors:  J W Pak; K L Knoke; D R Noguera; B G Fox; G H Chambliss
Journal:  Appl Environ Microbiol       Date:  2000-11       Impact factor: 4.792

4.  The multidrug efflux regulator TtgV recognizes a wide range of structurally different effectors in solution and complexed with target DNA: evidence from isothermal titration calorimetry.

Authors:  María-Eugenia Guazzaroni; Tino Krell; Antonia Felipe; Raquel Ruiz; Cuixiang Meng; Xiaodong Zhang; María-Trinidad Gallegos; Juan L Ramos
Journal:  J Biol Chem       Date:  2005-03-13       Impact factor: 5.157

5.  Complete genome sequence and comparative analysis of the metabolically versatile Pseudomonas putida KT2440.

Authors:  K E Nelson; C Weinel; I T Paulsen; R J Dodson; H Hilbert; V A P Martins dos Santos; D E Fouts; S R Gill; M Pop; M Holmes; L Brinkac; M Beanan; R T DeBoy; S Daugherty; J Kolonay; R Madupu; W Nelson; O White; J Peterson; H Khouri; I Hance; P Chris Lee; E Holtzapple; D Scanlan; K Tran; A Moazzez; T Utterback; M Rizzo; K Lee; D Kosack; D Moestl; H Wedler; J Lauber; D Stjepandic; J Hoheisel; M Straetz; S Heim; C Kiewitz; J A Eisen; K N Timmis; A Düsterhöft; B Tümmler; C M Fraser
Journal:  Environ Microbiol       Date:  2002-12       Impact factor: 5.491

6.  Structural and functional impairment of an Old Yellow Enzyme homologue upon affinity tag incorporation.

Authors:  Teresa B Fitzpatrick; Sigrid Auweter; Karina Kitzing; Tim Clausen; Nikolaus Amrhein; Peter Macheroux
Journal:  Protein Expr Purif       Date:  2004-08       Impact factor: 1.650

7.  Biotransformation of explosives by the old yellow enzyme family of flavoproteins.

Authors:  Richard E Williams; Deborah A Rathbone; Nigel S Scrutton; Neil C Bruce
Journal:  Appl Environ Microbiol       Date:  2004-06       Impact factor: 4.792

Review 8.  TNT biotransformation: when chemistry confronts mineralization.

Authors:  Barth F Smets; Hong Yin; Abraham Esteve-Nuñez
Journal:  Appl Microbiol Biotechnol       Date:  2007-05-30       Impact factor: 4.813

9.  Escherichia coli has multiple enzymes that attack TNT and release nitrogen for growth.

Authors:  M Mar González-Pérez; Pieter van Dillewijn; Rolf-M Wittich; Juan L Ramos
Journal:  Environ Microbiol       Date:  2007-06       Impact factor: 5.491

10.  Crystal structures of multidrug binding protein TtgR in complex with antibiotics and plant antimicrobials.

Authors:  Yilmaz Alguel; Cuixiang Meng; Wilson Terán; Tino Krell; Juan L Ramos; María-Trinidad Gallegos; Xiaodong Zhang
Journal:  J Mol Biol       Date:  2007-03-30       Impact factor: 5.469

View more
  8 in total

1.  Redundancy of enzymes for formaldehyde detoxification in Pseudomonas putida.

Authors:  Amalia Roca; Jose J Rodríguez-Herva; Juan L Ramos
Journal:  J Bacteriol       Date:  2009-03-20       Impact factor: 3.490

2.  Type II hydride transferases from different microorganisms yield nitrite and diarylamines from polynitroaromatic compounds.

Authors:  Pieter van Dillewijn; Rolf-Michael Wittich; Antonio Caballero; Juan-Luis Ramos
Journal:  Appl Environ Microbiol       Date:  2008-09-12       Impact factor: 4.792

3.  Microbial responses to xenobiotic compounds. Identification of genes that allow Pseudomonas putida KT2440 to cope with 2,4,6-trinitrotoluene.

Authors:  Matilde Fernández; Estrella Duque; Paloma Pizarro-Tobías; Pieter Van Dillewijn; Rolf-Michael Wittich; Juan L Ramos
Journal:  Microb Biotechnol       Date:  2009-03       Impact factor: 5.813

4.  Systems Biology Approach to Bioremediation of Nitroaromatics: Constraint-Based Analysis of 2,4,6-Trinitrotoluene Biotransformation by Escherichia coli.

Authors:  Maryam Iman; Tabassom Sobati; Yunes Panahi; Meysam Mobasheri
Journal:  Molecules       Date:  2017-08-14       Impact factor: 4.411

5.  The Sycamore Maple Bacterial Culture Collection From a TNT Polluted Site Shows Novel Plant-Growth Promoting and Explosives Degrading Bacteria.

Authors:  Sofie Thijs; Wouter Sillen; Sascha Truyens; Bram Beckers; Jonathan van Hamme; Pieter van Dillewijn; Pieter Samyn; Robert Carleer; Nele Weyens; Jaco Vangronsveld
Journal:  Front Plant Sci       Date:  2018-08-03       Impact factor: 5.753

6.  Biochemical and structural characterization of Haemophilus influenzae nitroreductase in metabolizing nitroimidazoles.

Authors:  Dake Liu; Thisuri N Wanniarachchi; Guangde Jiang; Gustavo Seabra; Shugeng Cao; Steven D Bruner; Yousong Ding
Journal:  RSC Chem Biol       Date:  2022-02-16

7.  Comparative Genomic Analysis of Antarctic Pseudomonas Isolates with 2,4,6-Trinitrotoluene Transformation Capabilities Reveals Their Unique Features for Xenobiotics Degradation.

Authors:  Ma Ángeles Cabrera; Sebastián L Márquez; José M Pérez-Donoso
Journal:  Genes (Basel)       Date:  2022-07-28       Impact factor: 4.141

8.  Draft Genome Sequence of Raoultella ornithinolytica TNT, a Trinitrotoluene-Denitrating and Plant Growth-Promoting Strain Isolated from Explosive-Contaminated Soil.

Authors:  Sofie Thijs; Jonathan Van Hamme; Panagiotis Gkorezis; Francois Rineau; Nele Weyens; Jaco Vangronsveld
Journal:  Genome Announc       Date:  2014-05-29
  8 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.