Literature DB >> 18787684

Laser capture microdissection in the genomic and proteomic era: targeting the genetic basis of cancer.

Barbara Domazet1, Gregory T Maclennan, Antonio Lopez-Beltran, Rodolfo Montironi, Liang Cheng.   

Abstract

The advent of new technologies has enabled deeper insight into processes at subcellular levels, which will ultimately improve diagnostic procedures and patient outcome. Thanks to cell enrichment methods, it is now possible to study cells in their native environment. This has greatly contributed to a rapid growth in several areas, such as gene expression analysis, proteomics, and metabolonomics. Laser capture microdissection (LCM) as a method of procuring subpopulations of cells under direct visual inspection is playing an important role in these areas. This review provides an overview of existing LCM technology and its downstream applications in genomics, proteomics, diagnostics and therapy.

Entities:  

Keywords:  Laser capture microdissection; biomarker discovery; carcinogenesis; clonality; genomics; prognosis; proteomics

Year:  2008        PMID: 18787684      PMCID: PMC2480591     

Source DB:  PubMed          Journal:  Int J Clin Exp Pathol        ISSN: 1936-2625


  74 in total

1.  Enrichment of epithelial cells for molecular studies.

Authors:  A Maitra; I I Wistuba; A K Virmani; M Sakaguchi; I Park; A Stucky; S Milchgrub; D Gibbons; J D Minna; A F Gazdar
Journal:  Nat Med       Date:  1999-04       Impact factor: 53.440

2.  Laser capture microdissection and two-dimensional polyacrylamide gel electrophoresis: evaluation of tissue preparation and sample limitations.

Authors:  Rachel A Craven; Nick Totty; Patricia Harnden; Peter J Selby; Rosamonde E Banks
Journal:  Am J Pathol       Date:  2002-03       Impact factor: 4.307

Review 3.  Laser-assisted cell microdissection using the PALM system.

Authors:  Patrick Micke; Arne Ostman; Joakim Lundeberg; Fredrik Ponten
Journal:  Methods Mol Biol       Date:  2005

4.  10q23.3 loss of heterozygosity is higher in lymph node-positive (pT2-3,N+) versus lymph node-negative (pT2-3,N0) prostate cancer.

Authors:  M A Rubin; A Gerstein; K Reid; D G Bostwick; L Cheng; R Parsons; N Papadopoulos
Journal:  Hum Pathol       Date:  2000-04       Impact factor: 3.466

5.  Laser-assisted preparation of single cells from stained histological slides for gene analysis.

Authors:  I Becker; K F Becker; M H Röhrl; H Höfler
Journal:  Histochem Cell Biol       Date:  1997 Oct-Nov       Impact factor: 4.304

6.  Rapid, efficient genotyping of clinical tumor samples by laser-capture microdissection/PCR/SSCP.

Authors:  D Dillon; K Zheng; J Costa
Journal:  Exp Mol Pathol       Date:  2001-06       Impact factor: 3.362

7.  Molecular genetic evidence for the independent origin of multifocal papillary tumors in patients with papillary renal cell carcinomas.

Authors:  Timothy D Jones; John N Eble; Mingsheng Wang; Gregory T MacLennan; Brett Delahunt; Matteo Brunelli; Guido Martignoni; Antonio Lopez-Beltran; Stephen M Bonsib; Thomas M Ulbright; Shaobo Zhang; Kelly Nigro; Liang Cheng
Journal:  Clin Cancer Res       Date:  2005-10-15       Impact factor: 12.531

8.  Histogenesis of sarcomatoid urothelial carcinoma of the urinary bladder: evidence for a common clonal origin with divergent differentiation.

Authors:  M-T Sung; M Wang; G T MacLennan; J N Eble; P-H Tan; A Lopez-Beltran; R Montironi; J J Harris; M Kuhar; L Cheng
Journal:  J Pathol       Date:  2007-03       Impact factor: 7.996

9.  Oat cell carcinoma of urinary bladder.

Authors:  C Cheng; A Nicholson; D G Lowe; R S Kirby
Journal:  Urology       Date:  1992-06       Impact factor: 2.649

10.  Molecular genetic evidence supporting the neoplastic nature of stromal cells in 'fibrosis' after chemotherapy for testicular germ cell tumours.

Authors:  L Cheng; S Zhang; M Wang; D D Davidson; M J Morton; J Huang; S Zheng; T D Jones; S D Beck; R S Foster
Journal:  J Pathol       Date:  2007-09       Impact factor: 7.996

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  19 in total

Review 1.  Approaches for targeted proteomics and its potential applications in neuroscience.

Authors:  Sumit Sethi; Dipti Chourasia; Ishwar S Parhar
Journal:  J Biosci       Date:  2015-09       Impact factor: 1.826

2.  RNA Isolation from Cell Specific Subpopulations Using Laser-capture Microdissection Combined with Rapid Immunolabeling.

Authors:  Audrey Chabrat; Hélène Doucet-Beaupré; Martin Lévesque
Journal:  J Vis Exp       Date:  2015-04-11       Impact factor: 1.355

Review 3.  Laser assisted microdissection, an efficient technique to understand tissue specific gene expression patterns and functional genomics in plants.

Authors:  Vibhav Gautam; Ananda K Sarkar
Journal:  Mol Biotechnol       Date:  2015-04       Impact factor: 2.695

4.  Laser-capture microdissection of murine lung for differential cellular RNA analysis.

Authors:  Jagadish Loganathan; Roshni Pandey; Nilesh Sudhakar Ambhore; Pawel Borowicz; Venkatachalem Sathish
Journal:  Cell Tissue Res       Date:  2019-02-02       Impact factor: 5.249

Review 5.  Beyond laser microdissection technology: follow the yellow brick road for cancer research.

Authors:  Luc G Legres; Anne Janin; Christophe Masselon; Philippe Bertheau
Journal:  Am J Cancer Res       Date:  2014-01-15       Impact factor: 6.166

Review 6.  Laser capture microdissection: Big data from small samples.

Authors:  Soma Datta; Lavina Malhotra; Ryan Dickerson; Scott Chaffee; Chandan K Sen; Sashwati Roy
Journal:  Histol Histopathol       Date:  2015-04-20       Impact factor: 2.303

7.  Proteomic analysis of prolactinoma cells by immuno-laser capture microdissection combined with online two-dimensional nano-scale liquid chromatography/mass spectrometry.

Authors:  Yingchao Liu; Jinsong Wu; Guoquan Yan; Ruiping Hou; Dongxiao Zhuang; Luping Chen; Qi Pang; Jianhong Zhu
Journal:  Proteome Sci       Date:  2010-01-29       Impact factor: 2.480

Review 8.  Laser capture microdissection in forensic research: a review.

Authors:  Mado Vandewoestyne; Dieter Deforce
Journal:  Int J Legal Med       Date:  2010-08-03       Impact factor: 2.686

9.  Laser capture microdissection of cervical human papillomavirus infections: copy number of the virus in cancerous and normal tissue and heterogeneous DNA methylation.

Authors:  Mina Kalantari; Alejandro Garcia-Carranca; Claudia Dalia Morales-Vazquez; Rosemary Zuna; Delia Perez Montiel; Itzel E Calleja-Macias; Bo Johansson; Sonia Andersson; Hans-Ulrich Bernard
Journal:  Virology       Date:  2009-06-04       Impact factor: 3.616

Review 10.  Microfluidic Sample Preparation for Single Cell Analysis.

Authors:  Sanjin Hosic; Shashi K Murthy; Abigail N Koppes
Journal:  Anal Chem       Date:  2015-12-03       Impact factor: 6.986

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