Literature DB >> 18780749

Patterns of amino acid evolution in the Drosophila ananassae chimeric gene, siren, parallel those of other Adh-derived chimeras.

Hung-Jui Shih1, Corbin D Jones.   

Abstract

siren1 and siren2 are novel alcohol dehydrogenase (Adh)-derived chimeric genes in the Drosophila bipectinata complex. D. ananassae, however, harbors a single homolog of these genes. Like other Adh-derived chimeric genes, siren evolved adaptively shortly after it was formed. These changes likely shifted the catalytic activity of siren.

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Year:  2008        PMID: 18780749      PMCID: PMC2567373          DOI: 10.1534/genetics.108.090068

Source DB:  PubMed          Journal:  Genetics        ISSN: 0016-6731            Impact factor:   4.562


  14 in total

1.  Codon-substitution models for heterogeneous selection pressure at amino acid sites.

Authors:  Z Yang; R Nielsen; N Goldman; A M Pedersen
Journal:  Genetics       Date:  2000-05       Impact factor: 4.562

2.  Evolving protein functional diversity in new genes of Drosophila.

Authors:  Jianming Zhang; Antony M Dean; Frédéric Brunet; Manyuan Long
Journal:  Proc Natl Acad Sci U S A       Date:  2004-11-08       Impact factor: 11.205

3.  Evolutionary history of the Drosophila bipectinata species complex.

Authors:  Artyom Kopp; Olga Barmina
Journal:  Genet Res       Date:  2005-02       Impact factor: 1.588

4.  Genetic variation in natural island populations of members of the Drosophila nasuta and Drosophila ananassae subgroups.

Authors:  W S Stone; M R Wheeler; F M Johnson; K I Kojima
Journal:  Proc Natl Acad Sci U S A       Date:  1968-01       Impact factor: 11.205

5.  An analysis of polymorphisms among isozyme loci in dark and light Drosophila ananassae strains from American and Western Samoa.

Authors:  F M Johnson; C G Kanapi; R H Richardson; M R Wheeler; W S Stone
Journal:  Proc Natl Acad Sci U S A       Date:  1966-07       Impact factor: 11.205

6.  Deletion of a conserved regulatory element in the Drosophila Adh gene leads to increased alcohol dehydrogenase activity but also delays development.

Authors:  J Parsch; J A Russell; I Beerman; D L Hartl; W Stephan
Journal:  Genetics       Date:  2000-09       Impact factor: 4.562

7.  Origin and evolution of a chimeric fusion gene in Drosophila subobscura, D. madeirensis and D. guanche.

Authors:  Corbin D Jones; Andrew W Custer; David J Begun
Journal:  Genetics       Date:  2005-03-21       Impact factor: 4.562

8.  The genetic structure of Drosophila ananassae populations from Asia, Australia and Samoa.

Authors:  Malcolm D Schug; Shelly G Smith; Allison Tozier-Pearce; Shane F McEvey
Journal:  Genetics       Date:  2007-01-21       Impact factor: 4.562

9.  Adaptive protein evolution at the Adh locus in Drosophila.

Authors:  J H McDonald; M Kreitman
Journal:  Nature       Date:  1991-06-20       Impact factor: 49.962

10.  Phylogeny of the Oriental Drosophila melanogaster species group: a multilocus reconstruction.

Authors:  Artyom Kopp; John R True
Journal:  Syst Biol       Date:  2002-10       Impact factor: 15.683

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  7 in total

1.  Adaptive impact of the chimeric gene Quetzalcoatl in Drosophila melanogaster.

Authors:  Rebekah L Rogers; Trevor Bedford; Ana M Lyons; Daniel L Hartl
Journal:  Proc Natl Acad Sci U S A       Date:  2010-06-01       Impact factor: 11.205

Review 2.  New gene evolution: little did we know.

Authors:  Manyuan Long; Nicholas W VanKuren; Sidi Chen; Maria D Vibranovski
Journal:  Annu Rev Genet       Date:  2013-09-13       Impact factor: 16.830

3.  Chimeric genes as a source of rapid evolution in Drosophila melanogaster.

Authors:  Rebekah L Rogers; Daniel L Hartl
Journal:  Mol Biol Evol       Date:  2011-07-18       Impact factor: 16.240

4.  Validation of rearrangement break points identified by paired-end sequencing in natural populations of Drosophila melanogaster.

Authors:  Julie M Cridland; Kevin R Thornton
Journal:  Genome Biol Evol       Date:  2010-01-13       Impact factor: 3.416

5.  Origin and ascendancy of a chimeric fusion gene: the beta/delta-globin gene of paenungulate mammals.

Authors:  Juan C Opazo; Angela M Sloan; Kevin L Campbell; Jay F Storz
Journal:  Mol Biol Evol       Date:  2009-03-30       Impact factor: 16.240

6.  Evolution at the subgene level: domain rearrangements in the Drosophila phylogeny.

Authors:  Yi-Chieh Wu; Matthew D Rasmussen; Manolis Kellis
Journal:  Mol Biol Evol       Date:  2011-09-07       Impact factor: 16.240

7.  Tandem Duplications and the Limits of Natural Selection in Drosophila yakuba and Drosophila simulans.

Authors:  Rebekah L Rogers; Julie M Cridland; Ling Shao; Tina T Hu; Peter Andolfatto; Kevin R Thornton
Journal:  PLoS One       Date:  2015-07-15       Impact factor: 3.240

  7 in total

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