Literature DB >> 18775322

Transcriptional regulation: it takes a village.

Barbara Panning1, Dylan J Taatjes.   

Abstract

A FASEB conference on "Transcriptional Regulation during Cell Growth, Differentiation and Development" met in June, 2008, just outside of Aspen in Snowmass Village, Colorado. The meeting covered a broad range of topics, including the structure of transcription factors (TFs), Preinitiation Complex (PIC) assembly, RNA polymerase II (Pol II) pausing, genome-wide patterns of histone modifications, and the role of TFs in development.

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Year:  2008        PMID: 18775322      PMCID: PMC4479147          DOI: 10.1016/j.molcel.2008.08.013

Source DB:  PubMed          Journal:  Mol Cell        ISSN: 1097-2765            Impact factor:   17.970


  28 in total

1.  Multiple p53-independent gene silencing mechanisms define the cellular response to p53 activation.

Authors:  Ramiro París; Ryan E Henry; Sarah J Stephens; Meagan McBryde; Joaquín M Espinosa
Journal:  Cell Cycle       Date:  2008-06-09       Impact factor: 4.534

2.  Distinct and predictive chromatin signatures of transcriptional promoters and enhancers in the human genome.

Authors:  Nathaniel D Heintzman; Rhona K Stuart; Gary Hon; Yutao Fu; Christina W Ching; R David Hawkins; Leah O Barrera; Sara Van Calcar; Chunxu Qu; Keith A Ching; Wei Wang; Zhiping Weng; Roland D Green; Gregory E Crawford; Bing Ren
Journal:  Nat Genet       Date:  2007-02-04       Impact factor: 38.330

3.  Dissecting direct reprogramming through integrative genomic analysis.

Authors:  Tarjei S Mikkelsen; Jacob Hanna; Xiaolan Zhang; Manching Ku; Marius Wernig; Patrick Schorderet; Bradley E Bernstein; Rudolf Jaenisch; Eric S Lander; Alexander Meissner
Journal:  Nature       Date:  2008-05-28       Impact factor: 49.962

4.  Combinatorial patterns of histone acetylations and methylations in the human genome.

Authors:  Zhibin Wang; Chongzhi Zang; Jeffrey A Rosenfeld; Dustin E Schones; Artem Barski; Suresh Cuddapah; Kairong Cui; Tae-Young Roh; Weiqun Peng; Michael Q Zhang; Keji Zhao
Journal:  Nat Genet       Date:  2008-06-15       Impact factor: 38.330

5.  Wnt signaling promotes reprogramming of somatic cells to pluripotency.

Authors:  Alexander Marson; Ruth Foreman; Brett Chevalier; Steve Bilodeau; Michael Kahn; Richard A Young; Rudolf Jaenisch
Journal:  Cell Stem Cell       Date:  2008-08-07       Impact factor: 24.633

6.  An essential switch in subunit composition of a chromatin remodeling complex during neural development.

Authors:  Julie Lessard; Jiang I Wu; Jeffrey A Ranish; Mimi Wan; Monte M Winslow; Brett T Staahl; Hai Wu; Ruedi Aebersold; Isabella A Graef; Gerald R Crabtree
Journal:  Neuron       Date:  2007-07-19       Impact factor: 17.173

7.  Nuclear actin regulates dynamic subcellular localization and activity of the SRF cofactor MAL.

Authors:  Maria K Vartiainen; Sebastian Guettler; Banafshe Larijani; Richard Treisman
Journal:  Science       Date:  2007-06-22       Impact factor: 47.728

8.  A comprehensive library of histone mutants identifies nucleosomal residues required for H3K4 methylation.

Authors:  Shima Nakanishi; Brian W Sanderson; Kym M Delventhal; William D Bradford; Karen Staehling-Hampton; Ali Shilatifard
Journal:  Nat Struct Mol Biol       Date:  2008-07-11       Impact factor: 15.369

9.  Determinants of cell- and gene-specific transcriptional regulation by the glucocorticoid receptor.

Authors:  Alex Yick-Lun So; Christina Chaivorapol; Eric C Bolton; Hao Li; Keith R Yamamoto
Journal:  PLoS Genet       Date:  2007-06       Impact factor: 5.917

10.  Mechanism of high-mobility group protein B enhancement of progesterone receptor sequence-specific DNA binding.

Authors:  Sarah C Roemer; James Adelman; Mair E A Churchill; Dean P Edwards
Journal:  Nucleic Acids Res       Date:  2008-05-12       Impact factor: 16.971

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  4 in total

1.  NuMA is required for the selective induction of p53 target genes.

Authors:  Hirokazu Ohata; Makoto Miyazaki; Ryo Otomo; Yuko Matsushima-Hibiya; Chihiro Otsubo; Takahiro Nagase; Hirofumi Arakawa; Jun Yokota; Hitoshi Nakagama; Yoichi Taya; Masato Enari
Journal:  Mol Cell Biol       Date:  2013-04-15       Impact factor: 4.272

2.  Single-molecule studies of transcription: from one RNA polymerase at a time to the gene expression profile of a cell.

Authors:  Feng Wang; Eric C Greene
Journal:  J Mol Biol       Date:  2011-01-19       Impact factor: 5.469

Review 3.  How the epigenome contributes to the development of psychiatric disorders.

Authors:  Timothy W Bredy; Yi E Sun; Michael S Kobor
Journal:  Dev Psychobiol       Date:  2010-05       Impact factor: 3.038

4.  RIP140 in thyroid hormone-repression and chromatin remodeling of Crabp1 gene during adipocyte differentiation.

Authors:  Sung Wook Park; Wei-Hong Huang; Shawna D Persaud; Li-Na Wei
Journal:  Nucleic Acids Res       Date:  2009-11       Impact factor: 16.971

  4 in total

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