Literature DB >> 18774935

Interaction of nucleotide excision repair factors XPC-HR23B, XPA, and RPA with damaged DNA.

Yu S Krasikova1, N I Rechkunova, E A Maltseva, I O Petruseva, V N Silnikov, T S Zatsepin, T S Oretskaya, O D Schärer, O I Lavrik.   

Abstract

The interaction of nucleotide excision repair factors--xeroderma pigmentosum complementation group C protein in complex with human homolog of yeast Rad23 protein (XPC-HR23B), replication protein A (RPA), and xeroderma pigmentosum complementation group A protein (XPA)--with 48-mer DNA duplexes imitating damaged DNA structures was investigated. All studied proteins demonstrated low specificity in binding to damaged DNA compared with undamaged DNA duplexes. RPA stimulates formation of XPC-HR23B complex with DNA, and when XPA and XPC-HR23B are simultaneously present in the reaction mixture a synergistic effect in binding of these proteins to DNA is observed. RPA crosslinks to DNA bearing photoreactive 5I-dUMP residue on one strand and fluorescein-substituted dUMP analog as a lesion in the opposite strand of DNA duplex and also stimulates cross-linking with XPC-HR23B. Therefore, RPA might be one of the main regulation factors at various stages of nucleotide excision repair. The data are in agreement with the cooperative binding model of nucleotide excision repair factors participating in pre-incision complex formation with DNA duplexes bearing damages.

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Year:  2008        PMID: 18774935     DOI: 10.1134/s0006297908080063

Source DB:  PubMed          Journal:  Biochemistry (Mosc)        ISSN: 0006-2979            Impact factor:   2.487


  9 in total

1.  Photo-cross-linking of XPC-Rad23B to cisplatin-damaged DNA reveals contacts with both strands of the DNA duplex and spans the DNA adduct.

Authors:  Tracy M Neher; Nadejda I Rechkunova; Olga I Lavrik; John J Turchi
Journal:  Biochemistry       Date:  2010-02-02       Impact factor: 3.162

2.  HIF1α regulated expression of XPA contributes to cisplatin resistance in lung cancer.

Authors:  Yanbin Liu; Amanda M Bernauer; Christin M Yingling; Steven A Belinsky
Journal:  Carcinogenesis       Date:  2012-03-31       Impact factor: 4.944

3.  Comparative analysis of interaction of human and yeast DNA damage recognition complexes with damaged DNA in nucleotide excision repair.

Authors:  Yuliya S Krasikova; Nadejda I Rechkunova; Ekaterina A Maltseva; Pavel E Pestryakov; Irina O Petruseva; Kaoru Sugasawa; Xuejing Chen; Jung-Hyun Min; Olga I Lavrik
Journal:  J Biol Chem       Date:  2013-02-26       Impact factor: 5.157

Review 4.  Every protagonist has a sidekick: Structural aspects of human xeroderma pigmentosum-binding proteins in nucleotide excision repair.

Authors:  Bruno César Feltes
Journal:  Protein Sci       Date:  2021-08-27       Impact factor: 6.725

5.  Localization of xeroderma pigmentosum group A protein and replication protein A on damaged DNA in nucleotide excision repair.

Authors:  Yuliya S Krasikova; Nadejda I Rechkunova; Ekaterina A Maltseva; Irina O Petruseva; Olga I Lavrik
Journal:  Nucleic Acids Res       Date:  2010-08-06       Impact factor: 16.971

Review 6.  DNA repair and genomic stability in lungs affected by acute injury.

Authors:  Luiz Philippe da Silva Sergio; Andre Luiz Mencalha; Adenilson de Souza da Fonseca; Flavia de Paoli
Journal:  Biomed Pharmacother       Date:  2019-09-09       Impact factor: 7.419

Review 7.  Role of the XPA protein in the NER pathway: A perspective on the function of structural disorder in macromolecular assembly.

Authors:  Elisa Fadda
Journal:  Comput Struct Biotechnol J       Date:  2015-12-08       Impact factor: 7.271

8.  RPA and XPA interaction with DNA structures mimicking intermediates of the late stages in nucleotide excision repair.

Authors:  Yuliya S Krasikova; Nadejda I Rechkunova; Ekaterina A Maltseva; Olga I Lavrik
Journal:  PLoS One       Date:  2018-01-10       Impact factor: 3.240

9.  New synthetic substrates of mammalian nucleotide excision repair system.

Authors:  Alexey Evdokimov; Irina Petruseva; Aleksandra Tsidulko; Ludmila Koroleva; Inna Serpokrylova; Vladimir Silnikov; Olga Lavrik
Journal:  Nucleic Acids Res       Date:  2013-04-22       Impact factor: 16.971

  9 in total

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