Literature DB >> 18773017

Fast, bias-free algorithm for tracking single particles with variable size and shape.

Andrew J Berglund1, Matthew D McMahon, Jabez J McClelland, J Alexander Liddle.   

Abstract

We introduce a fast and robust technique for single-particle tracking with nanometer accuracy. We extract the center-of-mass of the image of a single particle with a simple, iterative algorithm that efficiently suppresses background-induced bias in a simplistic centroid estimator. Unlike many commonly used algorithms, our position estimator requires no prior information about the shape or size of the tracked particle image and uses only simple arithmetic operations, making it appropriate for future hardware implementation and real-time feedback applications. We demonstrate it both numerically and experimentally, using an inexpensive CCD camera to localize 190 nm fluorescent microspheres to better than 5 nm.

Mesh:

Year:  2008        PMID: 18773017     DOI: 10.1364/oe.16.014064

Source DB:  PubMed          Journal:  Opt Express        ISSN: 1094-4087            Impact factor:   3.894


  15 in total

1.  Non-bias-limited tracking of spherical particles, enabling nanometer resolution at low magnification.

Authors:  Marijn T J van Loenhout; Jacob W J Kerssemakers; Iwijn De Vlaminck; Cees Dekker
Journal:  Biophys J       Date:  2012-05-15       Impact factor: 4.033

2.  Single-pixel interior filling function approach for detecting and correcting errors in particle tracking.

Authors:  Stanislav Burov; Patrick Figliozzi; Binhua Lin; Stuart A Rice; Norbert F Scherer; Aaron R Dinner
Journal:  Proc Natl Acad Sci U S A       Date:  2016-12-27       Impact factor: 11.205

3.  State space approach to single molecule localization in fluorescence microscopy.

Authors:  Milad R Vahid; Jerry Chao; Dongyoung Kim; E Sally Ward; Raimund J Ober
Journal:  Biomed Opt Express       Date:  2017-02-06       Impact factor: 3.732

Review 4.  Feedback traps for virtual potentials.

Authors:  Momčilo Gavrilov; John Bechhoefer
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2017-03-06       Impact factor: 4.226

Review 5.  Light sheet approaches for improved precision in 3D localization-based super-resolution imaging in mammalian cells [Invited].

Authors:  Anna-Karin Gustavsson; Petar N Petrov; W E Moerner
Journal:  Opt Express       Date:  2018-05-14       Impact factor: 3.894

Review 6.  Precisely and accurately localizing single emitters in fluorescence microscopy.

Authors:  Hendrik Deschout; Francesca Cella Zanacchi; Michael Mlodzianoski; Alberto Diaspro; Joerg Bewersdorf; Samuel T Hess; Kevin Braeckmans
Journal:  Nat Methods       Date:  2014-03       Impact factor: 28.547

Review 7.  Fluorophore localization algorithms for super-resolution microscopy.

Authors:  Alex Small; Shane Stahlheber
Journal:  Nat Methods       Date:  2014-03       Impact factor: 28.547

8.  Direct measurement of weakly nonequilibrium system entropy is consistent with Gibbs-Shannon form.

Authors:  Momčilo Gavrilov; Raphaël Chétrite; John Bechhoefer
Journal:  Proc Natl Acad Sci U S A       Date:  2017-10-03       Impact factor: 11.205

Review 9.  Identifying mechanisms of interfacial dynamics using single-molecule tracking.

Authors:  Mark Kastantin; Robert Walder; Daniel K Schwartz
Journal:  Langmuir       Date:  2012-07-11       Impact factor: 3.882

10.  Maximum precision closed-form solution for localizing diffraction-limited spots in noisy images.

Authors:  Joshua D Larkin; Peter R Cook
Journal:  Opt Express       Date:  2012-07-30       Impact factor: 3.894

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