| Literature DB >> 18767354 |
Hyun-Woo Cho1, Seoung Bum Kim, Myong K Jeong, Youngja Park, Nana Gletsu Miller, Thomas R Ziegler, Dean P Jones.
Abstract
This study presents three feature selection methods for identifying the metabolite features in nuclear magnetic resonance spectra that contribute to the distinction of samples among varying nutritional conditions. Principal component analysis, Fisher discriminant analysis, and Partial Least Square Discriminant Analysis (PLS-DA) were used to calculate the importance of individual metabolite feature in spectra. Moreover, an Orthogonal Signal Correction (OSC) filter was used to eliminate unnecessary variations in spectra. We evaluated the presented methods by comparing the ability of classification based on the features selected by each method. The result showed that the best classification was achieved from an OSC-PLS-DA model.Mesh:
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Year: 2008 PMID: 18767354 PMCID: PMC3883573 DOI: 10.1504/ijdmb.2008.019097
Source DB: PubMed Journal: Int J Data Min Bioinform ISSN: 1748-5673 Impact factor: 0.667