| Literature DB >> 18762868 |
Dries Verdegem1, Klaas Dijkstra, Xavier Hanoulle, Guy Lippens.
Abstract
We have developed a graphics based algorithm for semi-automated protein NMR assignments. Using the basic sequential triple resonance assignment strategy, the method is inspired by the Boolean operators as it applies "AND"-, "OR"- and "NOT"-like operations on planes pulled out of the classical three-dimensional spectra to obtain its functionality. The method's strength lies in the continuous graphical presentation of the spectra, allowing both a semi-automatic peaklist construction and sequential assignment. We demonstrate here its general use for the case of a folded protein with a well-dispersed spectrum, but equally for a natively unfolded protein where spectral resolution is minimal.Mesh:
Substances:
Year: 2008 PMID: 18762868 DOI: 10.1007/s10858-008-9262-2
Source DB: PubMed Journal: J Biomol NMR ISSN: 0925-2738 Impact factor: 2.835