Literature DB >> 18762443

Exploring plant biodiversity: the Physcomitrella genome and beyond.

Daniel Lang1, Andreas D Zimmer, Stefan A Rensing, Ralf Reski.   

Abstract

For decades, plant molecular biology has focused on only a few angiosperm species. Recently, the approximately 500mega base pairs (Mb) of the haploid Physcomitrella patens genome were sequenced and annotated. Mosses such as P. patens occupy a key evolutionary position halfway between green algae and flowering plants. This draft genome, in comparison to existing genome data from other plants, allows evolutionary insights into the conquest of land by plants and the molecular biodiversity that land plants exhibit. As a model organism, P. patens provides a well-developed molecular toolbox, including efficient gene targeting in combination with the morphologically simple moss tissues. We describe current as well as future tools for P. patens research and the prospects they offer for plant research in general.

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Year:  2008        PMID: 18762443     DOI: 10.1016/j.tplants.2008.07.002

Source DB:  PubMed          Journal:  Trends Plant Sci        ISSN: 1360-1385            Impact factor:   18.313


  58 in total

Review 1.  Thermal energy dissipation and xanthophyll cycles beyond the Arabidopsis model.

Authors:  José Ignacio García-Plazaola; Raquel Esteban; Beatriz Fernández-Marín; Ilse Kranner; Albert Porcar-Castell
Journal:  Photosynth Res       Date:  2012-07-08       Impact factor: 3.573

2.  Endosymbiotic origin and differential loss of eukaryotic genes.

Authors:  Chuan Ku; Shijulal Nelson-Sathi; Mayo Roettger; Filipa L Sousa; Peter J Lockhart; David Bryant; Einat Hazkani-Covo; James O McInerney; Giddy Landan; William F Martin
Journal:  Nature       Date:  2015-08-19       Impact factor: 49.962

3.  Identification of two additional members of the tRNA isopentenyltransferase family in Physcomitrella patens.

Authors:  Gunvant Patil; Bjorn Nicander
Journal:  Plant Mol Biol       Date:  2013-05-28       Impact factor: 4.076

4.  Regulation of sulfate assimilation in Physcomitrella patens: mosses are different!

Authors:  Corinna Hermsen; Anna Koprivova; Colette Matthewman; Dirk Wesenberg; Gerd-Joachim Krauss; Stanislav Kopriva
Journal:  Planta       Date:  2010-05-16       Impact factor: 4.116

5.  Rescue and characterization of episomally replicating DNA from the moss Physcomitrella.

Authors:  Eva Murén; Anders Nilsson; Mikael Ulfstedt; Monika Johansson; Hans Ronne
Journal:  Proc Natl Acad Sci U S A       Date:  2009-11-05       Impact factor: 11.205

6.  A novel calcium binding site in the slow vacuolar cation channel TPC1 senses luminal calcium levels.

Authors:  Beata Dadacz-Narloch; Diana Beyhl; Christina Larisch; Enrique J López-Sanjurjo; Ralf Reski; Kazuyuki Kuchitsu; Thomas D Müller; Dirk Becker; Gerald Schönknecht; Rainer Hedrich
Journal:  Plant Cell       Date:  2011-07-15       Impact factor: 11.277

Review 7.  Actin, a central player in cell shape and movement.

Authors:  Thomas D Pollard; John A Cooper
Journal:  Science       Date:  2009-11-27       Impact factor: 47.728

8.  A PIIB-type Ca2+-ATPase is essential for stress adaptation in Physcomitrella patens.

Authors:  Enas Qudeimat; Alexander M C Faltusz; Glen Wheeler; Daniel Lang; Hauke Holtorf; Colin Brownlee; Ralf Reski; Wolfgang Frank
Journal:  Proc Natl Acad Sci U S A       Date:  2008-12-02       Impact factor: 11.205

9.  Auxin-binding proteins without KDEL sequence in the moss Funaria hygrometrica.

Authors:  Kishore C S Panigrahi; Madhusmita Panigrahy; Marco Vervliet-Scheebaum; Daniel Lang; Ralf Reski; Man Mohan Johri
Journal:  Plant Cell Rep       Date:  2009-10-02       Impact factor: 4.570

10.  Targeted gene knockouts reveal overlapping functions of the five Physcomitrella patens FtsZ isoforms in chloroplast division, chloroplast shaping, cell patterning, plant development, and gravity sensing.

Authors:  Anja Martin; Daniel Lang; Sebastian T Hanke; Stefanie J X Mueller; Eric Sarnighausen; Marco Vervliet-Scheebaum; Ralf Reski
Journal:  Mol Plant       Date:  2009-09-10       Impact factor: 13.164

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