Literature DB >> 18761457

Electron capture by a hydrated gaseous peptide: effects of water on fragmentation and molecular survival.

James S Prell1, Jeremy T O'Brien, Anne I S Holm, Ryan D Leib, William A Donald, Evan R Williams.   

Abstract

The effects of water on electron capture dissociation products, molecular survival, and recombination energy are investigated for diprotonated Lys-Tyr-Lys solvated by between zero and 25 water molecules. For peptide ions with between 12 and 25 water molecules attached, electron capture results in a narrow distribution of product ions corresponding to primarily the loss of 10-12 water molecules from the reduced precursor. From these data, the recombination energy (RE) is determined to be equal to the energy that is lost by evaporating on average 10.7 water molecules, or 4.3 eV. Because water stabilizes ions, this value is a lower limit to the RE of the unsolvated ion, but it indicates that the majority of the available RE is deposited into internal modes of the peptide ion. Plotting the fragment ion abundances for ions formed from precursors with fewer than 11 water molecules as a function of hydration extent results in an energy resolved breakdown curve from which the appearance energies of the b 2 (+), y 2 (+), z 2 (+*), c 2 (+), and (KYK + H) (+) fragment ions formed from this peptide ion can be obtained; these values are 78, 88, 42, 11, and 9 kcal/mol, respectively. The propensity for H atom loss and ammonia loss from the precursor changes dramatically with the extent of hydration, and this change in reactivity can be directly attributed to a "caging" effect by the water molecules. These are the first experimental measurements of the RE and appearance energies of fragment ions due to electron capture dissociation of a multiply charged peptide. This novel ion nanocalorimetry technique can be applied more generally to other exothermic reactions that are not readily accessible to investigation by more conventional thermochemical methods.

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Year:  2008        PMID: 18761457      PMCID: PMC2673717          DOI: 10.1021/ja8022434

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  51 in total

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3.  Effects of charge state and cationizing agent on the electron capture dissociation of a peptide.

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4.  Electron transfer dissociation of peptide anions.

Authors:  Joshua J Coon; Jeffrey Shabanowitz; Donald F Hunt; John E P Syka
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5.  Investigation of the presence of b ions in electron capture dissociation mass spectra.

Authors:  Helen J Cooper
Journal:  J Am Soc Mass Spectrom       Date:  2005-10-25       Impact factor: 3.109

6.  Experimental and theoretical investigations of the loss of amino acid side chains in electron capture dissociation of model peptides.

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Journal:  J Am Soc Mass Spectrom       Date:  2005-09       Impact factor: 3.109

7.  Peptide cation-radicals. A computational study of the competition between peptide N-Calpha bond cleavage and loss of the side chain in the [GlyPhe-NH2 + 2H]+. cation-radical.

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Journal:  J Am Chem Soc       Date:  2003-05-14       Impact factor: 15.419

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Authors:  Nick C Polfer; Jos Oomens; Sandor Suhai; Béla Paizs
Journal:  J Am Chem Soc       Date:  2007-04-12       Impact factor: 15.419

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  13 in total

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Authors:  Hisham Ben Hamidane; Huan He; Oleg Yu Tsybin; Mark R Emmett; Christopher L Hendrickson; Alan G Marshall; Yury O Tsybin
Journal:  J Am Soc Mass Spectrom       Date:  2009-02-13       Impact factor: 3.109

2.  Measuring the extent and width of internal energy deposition in ion activation using nanocalorimetry.

Authors:  William A Donald; Evan R Williams
Journal:  J Am Soc Mass Spectrom       Date:  2009-12-28       Impact factor: 3.109

3.  Electron capture dissociation product ion abundances at the X amino acid in RAAAA-X-AAAAK peptides correlate with amino acid polarity and radical stability.

Authors:  Aleksey Vorobyev; Hisham Ben Hamidane; Yury O Tsybin
Journal:  J Am Soc Mass Spectrom       Date:  2009-09-03       Impact factor: 3.109

4.  Measuring internal energy deposition in collisional activation using hydrated ion nanocalorimetry to obtain peptide dissociation energies and entropies.

Authors:  Maria Demireva; Evan R Williams
Journal:  J Am Soc Mass Spectrom       Date:  2010-03-09       Impact factor: 3.109

5.  Real-time hydrogen/deuterium exchange kinetics via supercharged electrospray ionization tandem mass spectrometry.

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Journal:  Anal Chem       Date:  2010-10-13       Impact factor: 6.986

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7.  Directly relating reduction energies of gaseous Eu(H2O)n(3+), n = 55-140, to aqueous solution: the absolute SHE potential and real proton solvation energy.

Authors:  William A Donald; Ryan D Leib; Maria Demireva; Jeremy T O'Brien; James S Prell; Evan R Williams
Journal:  J Am Chem Soc       Date:  2009-09-23       Impact factor: 15.419

8.  Electron capture dissociation of trivalent metal ion-peptide complexes.

Authors:  Tawnya G Flick; William A Donald; Evan R Williams
Journal:  J Am Soc Mass Spectrom       Date:  2013-01-03       Impact factor: 3.109

9.  On the charge partitioning between c and z fragments formed after electron-capture induced dissociation of charge-tagged Lys-Lys and Ala-Lys dipeptide dications.

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Journal:  J Am Soc Mass Spectrom       Date:  2009-07-03       Impact factor: 3.109

10.  Probing the mechanism of electron capture and electron transfer dissociation using tags with variable electron affinity.

Authors:  Chang Ho Sohn; Cheol K Chung; Sheng Yin; Prasanna Ramachandran; Joseph A Loo; J L Beauchamp
Journal:  J Am Chem Soc       Date:  2009-04-22       Impact factor: 15.419

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