Literature DB >> 16525512

Blackbody infrared radiative dissociation of bradykinin and its analogues: energetics, dynamics, and evidence for salt-bridge structures in the gas phase.

P D Schnier1, W D Price, R A Jockusch, E R Williams.   

Abstract

Blackbody infrared radiative dissociation (BIRD) spectra of singly and doubly protonated bradykinin and its analogues are measured in a Fourier-transform mass spectrometer. Rate constants for dissociation are measured as a function of temperature with reaction delays up to 600 s. From these data, Arrhenius activation parameters in the zero-pressure limit are obtained. The activation parameters and dissociation products for the singly protonated ions are highly sensitive to small changes in ion structure. The Arrhenius activation energy (E(a)) and pre-exponential (or frequency factor, A) of the singly protonated ions investigated here range from 0.6 to 1.4 eV and 10(5) to 10(12) s(-1), respectively. For bradykinin and its analogues differing by modification of the residues between the two arginine groups on either end of the molecule, the singly and doubly protonated ions have average activation energies of 1.2 and 0.8 eV, respectively, and average A values of 10(8) and 10(12) s(-1), respectively, i.e., the presence of a second charge reduces the activation energy by 0.4 eV and decreases the A value by a factor of 10(4). This demonstrates that the presence of a second charge can dramatically influence the dissociation dynamics of these ions. The doubly protonated methyl ester of bradykinin has an E(a) of 0.82 eV, comparable to the value of 0.84 eV for bradykinin itself. However, this value is 0.21 +/- 0.08 eV greater than that of singly protonated methyl ester of bradykinin, indicating that the Coulomb repulsion is not the most significant factor in the activation energy of this ion. Both singly and doubly protonated Lys-bradykinin ions have higher activation energies than the corresponding bradykinin ions indicating that the addition of a basic residue stabilizes these ions with respect to dissociation. Methylation of the carboxylic acid group of the C-terminus reduces the E(a) of bradykinin from 1.3 to 0.6 eV and the A factor from 1012 to 105 s(-1). This modification also dramatically changes the dissociation products. Similar results are observed for [Ala(6)]-bradykinin and its methyl ester. These results, in combination with others presented here, provide experimental evidence that the most stable form of singly protonated bradykinin is a salt-bridge structure.

Entities:  

Year:  1996        PMID: 16525512      PMCID: PMC1393282          DOI: 10.1021/ja9609157

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  34 in total

1.  Matrix-assisted laser desorption/ionization mass spectrometry of biopolymers.

Authors:  F Hillenkamp; M Karas; R C Beavis; B T Chait
Journal:  Anal Chem       Date:  1991-12-15       Impact factor: 6.986

2.  An investigation of the energetics of peptide ion dissociation by laser desorption chemical ionization fourier transform mass spectrometry.

Authors:  J P Speir; I J Amster
Journal:  J Am Soc Mass Spectrom       Date:  1995-11       Impact factor: 3.109

3.  On the maximum charge state and proton transfer reactivity of peptide and protein ions formed by electrospray ionization.

Authors:  P D Schnier; D S Gross; E R Williams
Journal:  J Am Soc Mass Spectrom       Date:  1995-11       Impact factor: 3.109

4.  Fragmentation reactions of multiply-protonated peptides and implications for sequencing by tandem mass spectrometry with low-energy collision-induced dissociation.

Authors:  X J Tang; P Thibault; R K Boyd
Journal:  Anal Chem       Date:  1993-10-15       Impact factor: 6.986

5.  Conformations and folding of lysozyme ions in vacuo.

Authors:  D S Gross; P D Schnier; S E Rodriguez-Cruz; C K Fagerquist; E R Williams
Journal:  Proc Natl Acad Sci U S A       Date:  1996-04-02       Impact factor: 11.205

6.  Proposal for a common nomenclature for sequence ions in mass spectra of peptides.

Authors:  P Roepstorff; J Fohlman
Journal:  Biomed Mass Spectrom       Date:  1984-11

7.  Thiaminase I (42 kDa) heterogeneity, sequence refinement, and active site location from high-resolution tandem mass spectrometry.

Authors:  N L Kelleher; C A Costello; T P Begley; F W McLafferty
Journal:  J Am Soc Mass Spectrom       Date:  1995-10       Impact factor: 3.109

8.  Gas-phase folding and unfolding of cytochrome c cations.

Authors:  T D Wood; R A Chorush; F M Wampler; D P Little; P B O'Connor; F W McLafferty
Journal:  Proc Natl Acad Sci U S A       Date:  1995-03-28       Impact factor: 11.205

Review 9.  Cation-pi interactions in chemistry and biology: a new view of benzene, Phe, Tyr, and Trp.

Authors:  D A Dougherty
Journal:  Science       Date:  1996-01-12       Impact factor: 47.728

10.  Collision cross sections for protein ions.

Authors:  T Covey; D J Douglas
Journal:  J Am Soc Mass Spectrom       Date:  1993-08       Impact factor: 3.109

View more
  92 in total

1.  Gas phase H/D exchange kinetics: DI versus D2O.

Authors:  T G Schaaff; J L Stephenson; S A McLuckey
Journal:  J Am Soc Mass Spectrom       Date:  2000-02       Impact factor: 3.109

2.  A database of 660 peptide ion cross sections: use of intrinsic size parameters for bona fide predictions of cross sections.

Authors:  S J Valentine; A E Counterman; D E Clemmer
Journal:  J Am Soc Mass Spectrom       Date:  1999-11       Impact factor: 3.109

3.  Evidence for ionization-related conformational differences of peptide ions in a quadrupole ion trap.

Authors:  A S Danell; G L Glish
Journal:  J Am Soc Mass Spectrom       Date:  2001-12       Impact factor: 3.109

Review 4.  Electrospray and tandem mass spectrometry in biochemistry.

Authors:  W J Griffiths; A P Jonsson; S Liu; D K Rai; Y Wang
Journal:  Biochem J       Date:  2001-05-01       Impact factor: 3.857

5.  H/D exchange of gas phase bradykinin ions in a linear quadrupole ion trap.

Authors:  Dunmin Mao; D J Douglas
Journal:  J Am Soc Mass Spectrom       Date:  2003-02       Impact factor: 3.109

6.  The role of acidic residues and of sodium ion adduction on the gas-phase H/D exchange of peptides and peptide dimers.

Authors:  John C Jurchen; Russell E Cooper; Evan R Williams
Journal:  J Am Soc Mass Spectrom       Date:  2003-12       Impact factor: 3.109

7.  Dissociation of different conformations of ubiquitin ions.

Authors:  Ethan R Badman; Cherokee S Hoaglund-Hyzer; David E Clemmer
Journal:  J Am Soc Mass Spectrom       Date:  2002-06       Impact factor: 3.109

8.  Fragmentation of amidinated peptide ions.

Authors:  Richard L Beardsley; James P Reilly
Journal:  J Am Soc Mass Spectrom       Date:  2004-02       Impact factor: 3.109

9.  A mechanistic investigation of the enhanced cleavage at histidine in the gas-phase dissociation of protonated peptides.

Authors:  George Tsaprailis; Hari Nair; Wenqing Zhong; Krishnamoorthy Kuppannan; Jean H Futrell; Vicki H Wysocki
Journal:  Anal Chem       Date:  2004-04-01       Impact factor: 6.986

10.  Dissociation kinetics of singly protonated leucine enkephalin investigated by time-resolved photodissociation tandem mass spectrometry.

Authors:  Jeong Hee Moon; So Hee Yoon; Yong Jin Bae; Myung Soo Kim
Journal:  J Am Soc Mass Spectrom       Date:  2010-03-27       Impact factor: 3.109

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.