Literature DB >> 18758236

Mechanisms of Ras membrane organization and signalling: Ras on a rocker.

Daniel Abankwa1, Alemayehu A Gorfe, John F Hancock.   

Abstract

Understanding the signalling function of Ras GTPases has been the focus of much research for over 20 years. Both the catalytic domain and the membrane anchoring C terminal hypervariable region (HVR) of Ras are necessary for its cellular function. However, while the highly conserved catalytic domain has been characterized in atomic detail, the structure of the full-length membrane-bound Ras has remained elusive. Lack of structural knowledge on the full-length protein limited our understanding of Ras signalling. For example, structures of the Ras catalytic domain solved in complex with effectors do not provide a basis for the functional specificity of different Ras isoforms. Recent molecular dynamics simulations in combination with biophysical and cell biological experiments have shown that the HVR and parts of the G domain cofunction with the lipid tails to anchor H-ras to the plasma membrane. In the GTP-bound state, H-ras adopts an orientation that allows read out by Ras effectors and translation into corresponding MAPK signalling. Here we discuss details of an analysis that suggests a novel balance model for Ras functioning. The balance model rationalizes Ras membrane orientation and may help explain isoform specific interactions of Ras with its effectors and modulators.

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Year:  2008        PMID: 18758236      PMCID: PMC2782589          DOI: 10.4161/cc.7.17.6596

Source DB:  PubMed          Journal:  Cell Cycle        ISSN: 1551-4005            Impact factor:   4.534


  38 in total

1.  H-ras, K-ras, and inner plasma membrane raft proteins operate in nanoclusters with differential dependence on the actin cytoskeleton.

Authors:  Sarah J Plowman; Cornelia Muncke; Robert G Parton; John F Hancock
Journal:  Proc Natl Acad Sci U S A       Date:  2005-10-13       Impact factor: 11.205

Review 2.  Ras signaling from plasma membrane and endomembrane microdomains.

Authors:  S J Plowman; J F Hancock
Journal:  Biochim Biophys Acta       Date:  2005-06-27

3.  Ras binding opens c-Raf to expose the docking site for mitogen-activated protein kinase kinase.

Authors:  Kenta Terai; Michiyuki Matsuda
Journal:  EMBO Rep       Date:  2005-03       Impact factor: 8.807

Review 4.  Signal transduction via Ras.

Authors:  A Wittinghofer
Journal:  Biol Chem       Date:  1998 Aug-Sep       Impact factor: 3.915

Review 5.  Functional rafts in cell membranes.

Authors:  K Simons; E Ikonen
Journal:  Nature       Date:  1997-06-05       Impact factor: 49.962

6.  Four human ras homologs differ in their abilities to activate Raf-1, induce transformation, and stimulate cell motility.

Authors:  J K Voice; R L Klemke; A Le; J H Jackson
Journal:  J Biol Chem       Date:  1999-06-11       Impact factor: 5.157

7.  The Ras-RasGAP complex: structural basis for GTPase activation and its loss in oncogenic Ras mutants.

Authors:  K Scheffzek; M R Ahmadian; W Kabsch; L Wiesmüller; A Lautwein; F Schmitz; A Wittinghofer
Journal:  Science       Date:  1997-07-18       Impact factor: 47.728

Review 8.  Plasma membrane phosphoinositide organization by protein electrostatics.

Authors:  Stuart McLaughlin; Diana Murray
Journal:  Nature       Date:  2005-12-01       Impact factor: 49.962

Review 9.  Renewing the conspiracy theory debate: does Raf function alone to mediate Ras oncogenesis?

Authors:  Gretchen A Repasky; Emily J Chenette; Channing J Der
Journal:  Trends Cell Biol       Date:  2004-11       Impact factor: 20.808

10.  Interdependent assembly of specific regulatory lipids and membrane fusion proteins into the vertex ring domain of docked vacuoles.

Authors:  Rutilio A Fratti; Youngsoo Jun; Alexey J Merz; Nathan Margolis; William Wickner
Journal:  J Cell Biol       Date:  2004-12-20       Impact factor: 10.539

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  35 in total

1.  Relation between the conformational heterogeneity and reaction cycle of Ras: molecular simulation of Ras.

Authors:  Chigusa Kobayashi; Shinji Saito
Journal:  Biophys J       Date:  2010-12-01       Impact factor: 4.033

Review 2.  Drugging Ras GTPase: a comprehensive mechanistic and signaling structural view.

Authors:  Shaoyong Lu; Hyunbum Jang; Shuo Gu; Jian Zhang; Ruth Nussinov
Journal:  Chem Soc Rev       Date:  2016-07-11       Impact factor: 54.564

3.  The role of G-domain orientation and nucleotide state on the Ras isoform-specific membrane interaction.

Authors:  Shobhna Kapoor; Katrin Weise; Mirko Erlkamp; Gemma Triola; Herbert Waldmann; Roland Winter
Journal:  Eur Biophys J       Date:  2012-08-01       Impact factor: 1.733

4.  The Plasma Membrane as a Competitive Inhibitor and Positive Allosteric Modulator of KRas4B Signaling.

Authors:  Chris Neale; Angel E García
Journal:  Biophys J       Date:  2020-01-22       Impact factor: 4.033

Review 5.  Plasma membrane regulates Ras signaling networks.

Authors:  Tanmay Sanjeev Chavan; Serena Muratcioglu; Richard Marszalek; Hyunbum Jang; Ozlem Keskin; Attila Gursoy; Ruth Nussinov; Vadim Gaponenko
Journal:  Cell Logist       Date:  2016-02-18

6.  Probing the Conformational and Energy Landscapes of KRAS Membrane Orientation.

Authors:  Priyanka Prakash; Alemayehu A Gorfe
Journal:  J Phys Chem B       Date:  2019-10-09       Impact factor: 2.991

7.  The importance of seeing surface (effects).

Authors:  James M Gruschus; R Andrew Byrd; Paul A Randazzo
Journal:  Structure       Date:  2014-03-04       Impact factor: 5.006

8.  Interaction of the N terminus of ADP-ribosylation factor with the PH domain of the GTPase-activating protein ASAP1 requires phosphatidylinositol 4,5-bisphosphate.

Authors:  Neeladri Sekhar Roy; Xiaoying Jian; Olivier Soubias; Peng Zhai; Jessica R Hall; Jessica N Dagher; Nathan P Coussens; Lisa M Jenkins; Ruibai Luo; Itoro O Akpan; Matthew D Hall; R Andrew Byrd; Marielle E Yohe; Paul A Randazzo
Journal:  J Biol Chem       Date:  2019-10-06       Impact factor: 5.157

9.  Ras membrane orientation and nanodomain localization generate isoform diversity.

Authors:  Daniel Abankwa; Alemayehu A Gorfe; Kerry Inder; John F Hancock
Journal:  Proc Natl Acad Sci U S A       Date:  2010-01-04       Impact factor: 11.205

10.  Signal integration by lipid-mediated spatial cross talk between Ras nanoclusters.

Authors:  Yong Zhou; Hong Liang; Travis Rodkey; Nicholas Ariotti; Robert G Parton; John F Hancock
Journal:  Mol Cell Biol       Date:  2013-12-23       Impact factor: 4.272

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