Literature DB >> 18756381

Base excision repair and its role in maintaining genome stability.

Joke Baute1, Anne Depicker.   

Abstract

For all living organisms, genome stability is important, but is also under constant threat because various environmental and endogenous damaging agents can modify the structural properties of DNA bases. As a defense, organisms have developed different DNA repair pathways. Base excision repair (BER) is the predominant pathway for coping with a broad range of small lesions resulting from oxidation, alkylation, and deamination, which modify individual bases without large effect on the double helix structure. As, in mammalian cells, this damage is estimated to account daily for 10(4) events per cell, the need for BER pathways is unquestionable. The damage-specific removal is carried out by a considerable group of enzymes, designated as DNA glycosylases. Each DNA glycosylase has its unique specificity and many of them are ubiquitous in microorganisms, mammals, and plants. Here, we review the importance of the BER pathway and we focus on the different roles of DNA glycosylases in various organisms.

Entities:  

Mesh:

Year:  2008        PMID: 18756381     DOI: 10.1080/10409230802309905

Source DB:  PubMed          Journal:  Crit Rev Biochem Mol Biol        ISSN: 1040-9238            Impact factor:   8.250


  39 in total

1.  Genome-wide surveillance of transcription errors in response to genotoxic stress.

Authors:  C Fritsch; J-F Gout; S Haroon; A Towheed; C Chung; J LaGosh; E McGann; X Zhang; Y Song; S Simpson; P S Danthi; B A Benayoun; D Wallace; K Thomas; M Lynch; M Vermulst
Journal:  Proc Natl Acad Sci U S A       Date:  2020-12-21       Impact factor: 11.205

2.  Refining the genetic alphabet: a late-period selection pressure?

Authors:  Andro C Rios; Yitzhak Tor
Journal:  Astrobiology       Date:  2012-09       Impact factor: 4.335

3.  Neurons efficiently repair glutamate-induced oxidative DNA damage by a process involving CREB-mediated up-regulation of apurinic endonuclease 1.

Authors:  Jenq-Lin Yang; Takashi Tadokoro; Guido Keijzers; Mark P Mattson; Vilhelm A Bohr
Journal:  J Biol Chem       Date:  2010-06-23       Impact factor: 5.157

4.  Site-specific Acetylation of Histone H3 Decreases Polymerase β Activity on Nucleosome Core Particles in Vitro.

Authors:  Yesenia Rodriguez; John M Hinz; Marian F Laughery; John J Wyrick; Michael J Smerdon
Journal:  J Biol Chem       Date:  2016-03-31       Impact factor: 5.157

Review 5.  DNA repair and systemic lupus erythematosus.

Authors:  Rithy Meas; Matthew J Burak; Joann B Sweasy
Journal:  DNA Repair (Amst)       Date:  2017-06-09

6.  Unencumbered Pol β lyase activity in nucleosome core particles.

Authors:  Yesenia Rodriguez; Michael J Howard; Matthew J Cuneo; Rajendra Prasad; Samuel H Wilson
Journal:  Nucleic Acids Res       Date:  2017-09-06       Impact factor: 16.971

7.  A one-step method for quantitative determination of uracil in DNA by real-time PCR.

Authors:  András Horváth; Beáta G Vértessy
Journal:  Nucleic Acids Res       Date:  2010-09-22       Impact factor: 16.971

8.  Evaluation of the pharmacodynamics and pharmacokinetics of the PARP inhibitor olaparib: a phase I multicentre trial in patients scheduled for elective breast cancer surgery.

Authors:  Nigel Bundred; Janis Gardovskis; Janusz Jaskiewicz; Janis Eglitis; Viktor Paramonov; Peter McCormack; Helen Swaisland; Maria Cavallin; Tony Parry; James Carmichael; J Michael Dixon
Journal:  Invest New Drugs       Date:  2013-01-13       Impact factor: 3.850

Review 9.  Base excision repair facilitates a functional relationship between Guanine oxidation and histone demethylation.

Authors:  Jianfeng Li; Andrea Braganza; Robert W Sobol
Journal:  Antioxid Redox Signal       Date:  2013-02-28       Impact factor: 8.401

10.  Biochemical properties and base excision repair complex formation of apurinic/apyrimidinic endonuclease from Pyrococcus furiosus.

Authors:  Shinichi Kiyonari; Saki Tahara; Tsuyoshi Shirai; Shigenori Iwai; Sonoko Ishino; Yoshizumi Ishino
Journal:  Nucleic Acids Res       Date:  2009-09-04       Impact factor: 16.971

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