Literature DB >> 18728384

Cleavage of the star strand facilitates assembly of some microRNAs into Ago2-containing silencing complexes in mammals.

Chanseok Shin1.   

Abstract

In animals, microRNAs (miRNAs) and small interfering RNAs (siRNAs) repress expression of protein coding genes by assembling distinct RNA-induced silencing complexes (RISCs). It has previously been shown that passenger-strand cleavage is the predominant mechanism when siRNA duplexes are loaded into Argonaute2 (Ago2)-containing RISC, while an unwinding bypass mechanism is favored for miRNA duplexes with mismatches. Here I present experimental data indicating that some mammalian miRNAs are assembled into Ago2-containing RISC by cleaving their corresponding miRNA star strands. This phenomenon may depend on the secondary structure near the scissile phosphate of the miRNA duplex. In addition, I show that ATP is not required for star-strand cleavage in this process. Taken together, the data here provide insight into the miRNA-loading mechanisms in mammals.

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Year:  2008        PMID: 18728384

Source DB:  PubMed          Journal:  Mol Cells        ISSN: 1016-8478            Impact factor:   5.034


  16 in total

1.  Thermodynamic stability of small hairpin RNAs highly influences the loading process of different mammalian Argonautes.

Authors:  Shuo Gu; Lan Jin; Feijie Zhang; Yong Huang; Dirk Grimm; John J Rossi; Mark A Kay
Journal:  Proc Natl Acad Sci U S A       Date:  2011-05-16       Impact factor: 11.205

2.  The atypical genesis and bioavailability of the plant-based small RNA MIR2911: Bulking up while breaking down.

Authors:  Jian Yang; Natee Kongchan; Cecilia Primo Planta; Joel R Neilson; Kendal D Hirschi
Journal:  Mol Nutr Food Res       Date:  2017-04-18       Impact factor: 5.914

Review 3.  An overview of microRNAs.

Authors:  Scott M Hammond
Journal:  Adv Drug Deliv Rev       Date:  2015-05-12       Impact factor: 15.470

4.  Expanding the microRNA targeting code: functional sites with centered pairing.

Authors:  Chanseok Shin; Jin-Wu Nam; Kyle Kai-How Farh; H Rosaria Chiang; Alena Shkumatava; David P Bartel
Journal:  Mol Cell       Date:  2010-06-25       Impact factor: 17.970

Review 5.  MicroRNA biogenesis: regulating the regulators.

Authors:  Emily F Finnegan; Amy E Pasquinelli
Journal:  Crit Rev Biochem Mol Biol       Date:  2012-11-19       Impact factor: 8.250

Review 6.  The Extensive Regulation of MicroRNA in Immune Thrombocytopenia.

Authors:  Yuerong Zhao; Siyuan Cui; Yan Wang; Ruirong Xu
Journal:  Clin Appl Thromb Hemost       Date:  2022 Jan-Dec       Impact factor: 3.512

Review 7.  The crucial role and regulations of miRNAs in zebrafish development.

Authors:  Manojit Bhattacharya; Ashish Ranjan Sharma; Garima Sharma; Bidhan Chandra Patra; Ju-Suk Nam; Chiranjib Chakraborty; Sang-Soo Lee
Journal:  Protoplasma       Date:  2016-01-28       Impact factor: 3.356

Review 8.  MicroRNAs: molecular features and role in cancer.

Authors:  Elodie Lages; Helene Ipas; Audrey Guttin; Houssam Nesr; Francois Berger; Jean-Paul Issartel
Journal:  Front Biosci (Landmark Ed)       Date:  2012-06-01

9.  mirPRo-a novel standalone program for differential expression and variation analysis of miRNAs.

Authors:  Jieming Shi; Min Dong; Lei Li; Lin Liu; Agustin Luz-Madrigal; Panagiotis A Tsonis; Katia Del Rio-Tsonis; Chun Liang
Journal:  Sci Rep       Date:  2015-10-05       Impact factor: 4.379

10.  Identification of microRNAs in Helicoverpa armigera and Spodoptera litura based on deep sequencing and homology analysis.

Authors:  Xie Ge; Yong Zhang; Jianhao Jiang; Yi Zhong; Xiaonan Yang; Zhiqian Li; Yongping Huang; Anjiang Tan
Journal:  Int J Biol Sci       Date:  2012-12-01       Impact factor: 6.580

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