Literature DB >> 18725290

Engineering the spatial organization of metabolic enzymes: mimicking nature's synergy.

Robert J Conrado1, Jeffrey D Varner, Matthew P DeLisa.   

Abstract

A growing body of evidence indicates that many cellular reactions within metabolic pathways are catalyzed not by free-floating 'soluble' enzymes, but via one or more membrane-associated multienzyme complexes. This type of macromolecular organization has important implications for the overall efficiency, specificity, and regulation of metabolic pathways. An ever-increasing number of biochemical and genetic studies on primary and secondary metabolism have laid a solid foundation for this model, providing compelling evidence in favor of the so-called channeling of intermediates between enzyme active sites and colocalization of enzymes inside a cell. In this review, we discuss several of nature's most notable multifunctional enzyme systems including the AROM complex and tryptophan synthase, each of which provides new fundamental insights into the structural organization of metabolic machinery within living cells. We then focus on the growing body of literature related to engineering strategies using protein chimeras and post-translational assembly mechanisms. Common among these techniques is the desire to mimic natural enzyme organization for optimizing the production of valuable metabolites with industrial and medical importance.

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Year:  2008        PMID: 18725290     DOI: 10.1016/j.copbio.2008.07.006

Source DB:  PubMed          Journal:  Curr Opin Biotechnol        ISSN: 0958-1669            Impact factor:   9.740


  76 in total

Review 1.  Exploiting plug-and-play synthetic biology for drug discovery and production in microorganisms.

Authors:  Marnix H Medema; Rainer Breitling; Roel Bovenberg; Eriko Takano
Journal:  Nat Rev Microbiol       Date:  2010-12-29       Impact factor: 60.633

2.  A Suite of Engineered GFP Molecules for Oligomeric Scaffolding.

Authors:  David J Leibly; Mark A Arbing; Inna Pashkov; Natasha DeVore; Geoffrey S Waldo; Thomas C Terwilliger; Todd O Yeates
Journal:  Structure       Date:  2015-08-13       Impact factor: 5.006

3.  Multimeric hemicellulases facilitate biomass conversion.

Authors:  Zhanmin Fan; Kurt Wagschal; Wei Chen; Michael D Montross; Charles C Lee; Ling Yuan
Journal:  Appl Environ Microbiol       Date:  2009-01-16       Impact factor: 4.792

4.  Synthetic protein scaffolds provide modular control over metabolic flux.

Authors:  John E Dueber; Gabriel C Wu; G Reza Malmirchegini; Tae Seok Moon; Christopher J Petzold; Adeeti V Ullal; Kristala L J Prather; Jay D Keasling
Journal:  Nat Biotechnol       Date:  2009-08-02       Impact factor: 54.908

5.  Synthetic metabolic pipelines.

Authors:  Matthew P DeLisa; Robert J Conrado
Journal:  Nat Biotechnol       Date:  2009-08       Impact factor: 54.908

Review 6.  Biosynthesis of terpene compounds using the non-model yeast Yarrowia lipolytica: grand challenges and a few perspectives.

Authors:  Alyssa M Worland; Jeffrey J Czajka; Yanran Li; Yechun Wang; Yinjie J Tang; Wei Wen Su
Journal:  Curr Opin Biotechnol       Date:  2020-04-13       Impact factor: 9.740

Review 7.  Nanoparticle-Hydrogel: A Hybrid Biomaterial System for Localized Drug Delivery.

Authors:  Weiwei Gao; Yue Zhang; Qiangzhe Zhang; Liangfang Zhang
Journal:  Ann Biomed Eng       Date:  2016-03-07       Impact factor: 3.934

8.  Channeling by Proximity: The Catalytic Advantages of Active Site Colocalization Using Brownian Dynamics.

Authors:  Patricia Bauler; Gary Huber; Thomas Leyh; J Andrew McCammon
Journal:  J Phys Chem Lett       Date:  2010-04-09       Impact factor: 6.475

9.  Engineering the cell surface display of cohesins for assembly of cellulosome-inspired enzyme complexes on Lactococcus lactis.

Authors:  Andrew S Wieczorek; Vincent J J Martin
Journal:  Microb Cell Fact       Date:  2010-09-14       Impact factor: 5.328

Review 10.  Toward engineering synthetic microbial metabolism.

Authors:  George H McArthur; Stephen S Fong
Journal:  J Biomed Biotechnol       Date:  2009-12-14
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