Literature DB >> 18722996

Signal amplification of target protein on heparin glycan microarray.

Tae-Joon Park1, Moo-Yeal Lee, Jonathan S Dordick, Robert J Linhardt.   

Abstract

A heparin glycan chip (HepGlyChip) with a 4800-fold enhanced signal-to-noise ratio as compared with the control without heparin was developed for high-throughput analysis of heparin-protein interactions for new drug development and for screening biological samples in diagnostic applications. As a proof of concept, a heparin glycan microarray was prepared on a poly(styrene-co-maleic anhydride) (PS-MA)-coated glass slide. Heparin was covalently immobilized on poly-l-lysine (PLL) layer with multiple binding sites by sulfo-ethylene glycol bis(succinimidylsuccinate) (sulfo-EGS), increasing the signal-to-noise ratio, minimizing nonspecific binding of target proteins, and resulting in a three-dimensional (3D) structure on the HepGlyChip. This on-chip signal amplification platform was successfully demonstrated by probing the heparin microarray with the highly specific heparin-binding protein antithrombin III (AT III).

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Year:  2008        PMID: 18722996      PMCID: PMC2783401          DOI: 10.1016/j.ab.2008.07.037

Source DB:  PubMed          Journal:  Anal Biochem        ISSN: 0003-2697            Impact factor:   3.365


  20 in total

1.  2003 Claude S. Hudson Award address in carbohydrate chemistry. Heparin: structure and activity.

Authors:  Robert J Linhardt
Journal:  J Med Chem       Date:  2003-06-19       Impact factor: 7.446

2.  Chemical space and biology.

Authors:  Christopher M Dobson
Journal:  Nature       Date:  2004-12-16       Impact factor: 49.962

3.  Microarrays of synthetic heparin oligosaccharides.

Authors:  Jose L de Paz; Christian Noti; Peter H Seeberger
Journal:  J Am Chem Soc       Date:  2006-03-08       Impact factor: 15.419

4.  On-chip synthesis and label-free assays of oligosaccharide arrays.

Authors:  Lan Ban; Milan Mrksich
Journal:  Angew Chem Int Ed Engl       Date:  2008       Impact factor: 15.336

5.  Carbohydrate microarrays: an advanced technology for functional studies of glycans.

Authors:  Injae Shin; Sungjin Park; Myung-ryul Lee
Journal:  Chemistry       Date:  2005-05-06       Impact factor: 5.236

Review 6.  Carbohydrate microarrays.

Authors:  Denong Wang
Journal:  Proteomics       Date:  2003-11       Impact factor: 3.984

7.  Carbohydrate chips for studying high-throughput carbohydrate-protein interactions.

Authors:  Sungjin Park; Myung-ryul Lee; Soon-Jin Pyo; Injae Shin
Journal:  J Am Chem Soc       Date:  2004-04-21       Impact factor: 15.419

Review 8.  Carbohydrate microarrays - a new set of technologies at the frontiers of glycomics.

Authors:  Ten Feizi; Fabio Fazio; Wengang Chai; Chi Huey Wong
Journal:  Curr Opin Struct Biol       Date:  2003-10       Impact factor: 6.809

Review 9.  Heparin-protein interactions.

Authors:  Ishan Capila; Robert J Linhardt
Journal:  Angew Chem Int Ed Engl       Date:  2002-02-01       Impact factor: 15.336

10.  Directional immobilization of heparin onto beaded supports.

Authors:  V D Nadkarni; A Pervin; R J Linhardt
Journal:  Anal Biochem       Date:  1994-10       Impact factor: 3.365

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  10 in total

Review 1.  Glycan microarrays of fluorescently-tagged natural glycans.

Authors:  Xuezheng Song; Jamie Heimburg-Molinaro; David F Smith; Richard D Cummings
Journal:  Glycoconj J       Date:  2015-04-16       Impact factor: 2.916

Review 2.  Engineering of routes to heparin and related polysaccharides.

Authors:  Ujjwal Bhaskar; Eric Sterner; Anne Marie Hickey; Akihiro Onishi; Fuming Zhang; Jonathan S Dordick; Robert J Linhardt
Journal:  Appl Microbiol Biotechnol       Date:  2011-11-03       Impact factor: 4.813

3.  Heparan Sulfate Microarray Reveals That Heparan Sulfate-Protein Binding Exhibits Different Ligand Requirements.

Authors:  Chengli Zong; Andre Venot; Xiuru Li; Weigang Lu; Wenyuan Xiao; Jo-Setti L Wilkes; Catherina L Salanga; Tracy M Handel; Lianchun Wang; Margreet A Wolfert; Geert-Jan Boons
Journal:  J Am Chem Soc       Date:  2017-07-07       Impact factor: 15.419

Review 4.  Chemoenzymatic synthesis of glycosaminoglycans: re-creating, re-modeling and re-designing nature's longest or most complex carbohydrate chains.

Authors:  Paul L DeAngelis; Jian Liu; Robert J Linhardt
Journal:  Glycobiology       Date:  2013-03-11       Impact factor: 4.313

Review 5.  Recent progress and applications in glycosaminoglycan and heparin research.

Authors:  Tatiana N Laremore; Fuming Zhang; Jonathan S Dordick; Jian Liu; Robert J Linhardt
Journal:  Curr Opin Chem Biol       Date:  2009-09-24       Impact factor: 8.822

6.  Construction of heparan sulfate microarray for investigating the binding of specific saccharide sequences to proteins.

Authors:  Maurice Horton; Guowei Su; Lin Yi; Zhangjie Wang; Yongmei Xu; Vijayakanth Pagadala; Fuming Zhang; David A Zaharoff; Ken Pearce; Robert J Linhardt; Jian Liu
Journal:  Glycobiology       Date:  2021-04-01       Impact factor: 4.313

Review 7.  Recent advances in microarray 3D bioprinting for high-throughput spheroid and tissue culture and analysis.

Authors:  Sunil Shrestha; Vinod Kumar Reddy Lekkala; Prabha Acharya; Darshita Siddhpura; Moo-Yeal Lee
Journal:  Essays Biochem       Date:  2021-08-10       Impact factor: 7.258

Review 8.  Preparation of Complex Glycans From Natural Sources for Functional Study.

Authors:  Qing Zhang; Zhonghua Li; Xuezheng Song
Journal:  Front Chem       Date:  2020-07-03       Impact factor: 5.221

Review 9.  Heparin: role in protein purification and substitution with animal-component free material.

Authors:  Svenja Nicolin Bolten; Ursula Rinas; Thomas Scheper
Journal:  Appl Microbiol Biotechnol       Date:  2018-08-09       Impact factor: 4.813

10.  On the specificity of heparin/heparan sulfate binding to proteins. Anion-binding sites on antithrombin and thrombin are fundamentally different.

Authors:  Philip D Mosier; Chandravel Krishnasamy; Glen E Kellogg; Umesh R Desai
Journal:  PLoS One       Date:  2012-11-12       Impact factor: 3.240

  10 in total

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