Literature DB >> 18718859

Alternative splicing in the NF-kappaB signaling pathway.

Joshua R Leeman1, Thomas D Gilmore.   

Abstract

Activation of transcription factor NF-kappaB can affect the expression of several hundred genes, many of which are involved in inflammation and immunity. The proper NF-kappaB transcriptional response is primarily regulated by post-translational modification of NF-kappaB signaling constituents. Herein, we review the accumulating evidence suggesting that alternative splicing of NF-kappaB signaling components is another means of controlling NF-kappaB signaling. Several alternative splicing events in both the tumor necrosis factor and Toll/interleukin-1 NF-kappaB signaling pathways can inhibit the NF-kappaB response, whereas others enhance NF-kappaB signaling. Alternative splicing of mRNAs encoding some NF-kappaB signaling components can be induced by prolonged exposure to an NF-kappaB-activating signal, such as lipopolysaccharide, suggesting a mechanism for negative feedback to dampen excessive NF-kappaB signaling. Moreover, some NF-kappaB alternative splicing events appear to be specific for certain diseases, and could serve as therapeutic targets or biomarkers.

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Year:  2008        PMID: 18718859      PMCID: PMC2624576          DOI: 10.1016/j.gene.2008.07.015

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  103 in total

1.  EST comparison indicates 38% of human mRNAs contain possible alternative splice forms.

Authors:  D Brett; J Hanke; G Lehmann; S Haase; S Delbrück; S Krueger; J Reich; P Bork
Journal:  FEBS Lett       Date:  2000-05-26       Impact factor: 4.124

2.  Differential roles of TLR2 and TLR4 in recognition of gram-negative and gram-positive bacterial cell wall components.

Authors:  O Takeuchi; K Hoshino; T Kawai; H Sanjo; H Takada; T Ogawa; K Takeda; S Akira
Journal:  Immunity       Date:  1999-10       Impact factor: 31.745

3.  Frequent alternative splicing of human genes.

Authors:  A A Mironov; J W Fickett; M S Gelfand
Journal:  Genome Res       Date:  1999-12       Impact factor: 9.043

4.  Novel splicing mutation in the NEMO (IKK-gamma) gene with severe immunodeficiency and heterogeneity of X-chromosome inactivation.

Authors:  Karen Helene Ørstavik; Marianne Kristiansen; Gun Peggy Knudsen; Kari Storhaug; Ashild Vege; Kristin Eiklid; Tore G Abrahamsen; Asma Smahi; Jon Steen-Johnsen
Journal:  Am J Med Genet A       Date:  2006-01-01       Impact factor: 2.802

5.  IL-1 signaling cascade in liver cells and the involvement of a soluble form of the IL-1 receptor accessory protein.

Authors:  L E Jensen; M Muzio; A Mantovani; A S Whitehead
Journal:  J Immunol       Date:  2000-05-15       Impact factor: 5.422

6.  Mutations of tumor necrosis factor alpha-responsive serine residues within the C-terminal transactivation domain of human transcription factor REL enhance its in vitro transforming ability.

Authors:  Daniel T Starczynowski; Joseph G Reynolds; Thomas D Gilmore
Journal:  Oncogene       Date:  2005-11-10       Impact factor: 9.867

7.  A novel splice variant of interleukin-1 receptor (IL-1R)-associated kinase 1 plays a negative regulatory role in Toll/IL-1R-induced inflammatory signaling.

Authors:  Navin Rao; Steven Nguyen; Karen Ngo; Wai-Ping Fung-Leung
Journal:  Mol Cell Biol       Date:  2005-08       Impact factor: 4.272

8.  An alternative splice product of IkappaB kinase (IKKgamma), IKKgamma-delta, differentially mediates cytokine and human T-cell leukemia virus type 1 tax-induced NF-kappaB activation.

Authors:  Tao Hai; Man-Lung Yeung; Thomas G Wood; Yuanfen Wei; Shoji Yamaoka; Zoran Gatalica; Kuan-Teh Jeang; Allan R Brasier
Journal:  J Virol       Date:  2006-05       Impact factor: 5.103

9.  CD14-dependent modulation of NF-kappaB alternative splicing in the lung after burn injury.

Authors:  Ho H Phan; Kiho Cho; Kelly S Sainz-Lyon; Soowan Shin; David G Greenhalgh
Journal:  Gene       Date:  2006-02-09       Impact factor: 3.688

10.  Myobacterium tuberculosis induces selective up-regulation of TLRs in the mononuclear leukocytes of patients with active pulmonary tuberculosis.

Authors:  Jung-Su Chang; Jim F Huggett; Keertan Dheda; Louise U Kim; Alimuddin Zumla; Graham A W Rook
Journal:  J Immunol       Date:  2006-03-01       Impact factor: 5.422

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  31 in total

1.  Alternative pre-mRNA splicing of Toll-like receptor signaling components in peripheral blood mononuclear cells from patients with ARDS.

Authors:  Rachel Z Blumhagen; Brenna R Hedin; Kenneth C Malcolm; Ellen L Burnham; Marc Moss; Edward Abraham; Tristan J Huie; Jerry A Nick; Tasha E Fingerlin; Scott Alper
Journal:  Am J Physiol Lung Cell Mol Physiol       Date:  2017-08-03       Impact factor: 5.464

2.  Deletion analysis and alternative splicing define a transactivation inhibitory domain in human oncoprotein REL.

Authors:  J R Leeman; M A Weniger; T F Barth; T D Gilmore
Journal:  Oncogene       Date:  2008-08-11       Impact factor: 9.867

Review 3.  Crosstalk in inflammation: the interplay of glucocorticoid receptor-based mechanisms and kinases and phosphatases.

Authors:  Ilse M E Beck; Wim Vanden Berghe; Linda Vermeulen; Keith R Yamamoto; Guy Haegeman; Karolien De Bosscher
Journal:  Endocr Rev       Date:  2009-11-04       Impact factor: 19.871

4.  Identification of an N-terminal truncation of the NF-κB p65 subunit that specifically modulates ribosomal protein S3-dependent NF-κB gene expression.

Authors:  Eric M Wier; Jordan Neighoff; Xin Sun; Kai Fu; Fengyi Wan
Journal:  J Biol Chem       Date:  2012-10-31       Impact factor: 5.157

5.  Identification of novel pretranslational regulatory mechanisms for NF-κB activation.

Authors:  Xiao Huang; Ren Gong; Xinyuan Li; Anthony Virtue; Fan Yang; Irene H Yang; Anh H Tran; Xiao-Feng Yang; Hong Wang
Journal:  J Biol Chem       Date:  2013-03-20       Impact factor: 5.157

Review 6.  Post-transcriptional regulation of gene expression in innate immunity.

Authors:  Susan Carpenter; Emiliano P Ricci; Blandine C Mercier; Melissa J Moore; Katherine A Fitzgerald
Journal:  Nat Rev Immunol       Date:  2014-06       Impact factor: 53.106

7.  Effect of Helicobacter pylori cdrA on interleukin-8 secretions and nuclear factor kappa B activation.

Authors:  Hiroaki Takeuchi; Ya-Nan Zhang; Dawn A Israel; Richard M Peek; Mikio Kamioka; Hideo Yanai; Norihito Morimoto; Tetsuro Sugiura
Journal:  World J Gastroenterol       Date:  2012-02-07       Impact factor: 5.742

8.  AltAnalyze and DomainGraph: analyzing and visualizing exon expression data.

Authors:  Dorothea Emig; Nathan Salomonis; Jan Baumbach; Thomas Lengauer; Bruce R Conklin; Mario Albrecht
Journal:  Nucleic Acids Res       Date:  2010-05-31       Impact factor: 16.971

9.  Differential splicing of the apoptosis-associated speck like protein containing a caspase recruitment domain (ASC) regulates inflammasomes.

Authors:  Nicole B Bryan; Andrea Dorfleutner; Sara J Kramer; Chawon Yun; Yon Rojanasakul; Christian Stehlik
Journal:  J Inflamm (Lond)       Date:  2010-05-18       Impact factor: 4.981

10.  Evidence for postinitiation regulation of mRNA biogenesis in tuberculosis.

Authors:  Hugh Salamon; Yaming Qiao; Jeff C Cheng; Ken D Yamaguchi; Patricia Soteropoulos; Michael Weiden; Maria Laura Gennaro; Richard Pine
Journal:  J Immunol       Date:  2013-02-01       Impact factor: 5.422

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