Literature DB >> 18718539

High-yield expression in E. coli and refolding of the bZIP domain of activating transcription factor 5.

Natalie A Ciaccio1, Matthew L Moreno, Rachel L Bauer, Jennifer S Laurence.   

Abstract

Activating transcription factor 5 (ATF5) recently has been demonstrated to play a critical role in promoting the survival of human glioblastoma cells. Interference with the function of ATF5 in an in vivo rat model caused glioma cell death in primary tumors but did not affect the status of normal cells surrounding the tumor, suggesting ATF5 may prove an ideal target for anti-cancer therapy. In order to examine ATF5 as a pharmaceutical target, the protein must be produced and purified to sufficient quantity to begin analyses. Here, a procedure for expressing and refolding the bZIP domain of ATF5 in sufficient yield and final concentration to permit assay development and structural characterization of this target using solution NMR is reported. Two-dimensional NMR and circular dichroism analyses indicate the protein exists in the partially alpha-helical, monomeric x-form conformation with only a small fraction of ATF5 participating in formation of higher-order structure, presumably coiled-coil homodimerization. Despite the persistence of monomers in solution even at high concentration, an electrophoretic mobility shift assay showed that ATF5 is able to bind to the cAMP response element (CRE) DNA motif. Polyacrylamide gel electrophoresis and mass spectrometry were used to confirm that ATF5 can participate in homodimer formation and that this dimerization is mediated by disulfide bond formation.

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Year:  2008        PMID: 18718539      PMCID: PMC2599749          DOI: 10.1016/j.pep.2008.07.011

Source DB:  PubMed          Journal:  Protein Expr Purif        ISSN: 1046-5928            Impact factor:   1.650


  53 in total

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2.  ATF-7, a novel bZIP protein, interacts with the PRL-1 protein-tyrosine phosphatase.

Authors:  C S Peters; X Liang; S Li; S Kannan; Y Peng; R Taub; R H Diamond
Journal:  J Biol Chem       Date:  2001-01-22       Impact factor: 5.157

3.  ExPASy: The proteomics server for in-depth protein knowledge and analysis.

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Journal:  Nucleic Acids Res       Date:  2003-07-01       Impact factor: 16.971

4.  Regulated expression of ATF5 is required for the progression of neural progenitor cells to neurons.

Authors:  James M Angelastro; Tatyana N Ignatova; Valery G Kukekov; Dennis A Steindler; George B Stengren; Cathy Mendelsohn; Lloyd A Greene
Journal:  J Neurosci       Date:  2003-06-01       Impact factor: 6.167

5.  The bZIP region of the plant transcription factor opaque-2 forms stable homodimers in solution and retains its helical structure upon subunit dissociation.

Authors:  Vitor Hugo Moreau; Alba C da Silva; Rodrigo M P Siloto; Ana Paula Valente; Adilson Leite; Fábio C L Almeida
Journal:  Biochemistry       Date:  2004-04-27       Impact factor: 3.162

Review 6.  Hydrogen peroxide: a key messenger that modulates protein phosphorylation through cysteine oxidation.

Authors:  S G Rhee; Y S Bae; S R Lee; J Kwon
Journal:  Sci STKE       Date:  2000-10-10

7.  Modular structure of cAMP response element binding protein 2 (CREB2).

Authors:  S Schoch; G Cibelli; A Magin; L Steinmüller; G Thiel
Journal:  Neurochem Int       Date:  2001-06       Impact factor: 3.921

Review 8.  Reactive oxygen species in cell signaling.

Authors:  V J Thannickal; B L Fanburg
Journal:  Am J Physiol Lung Cell Mol Physiol       Date:  2000-12       Impact factor: 5.464

9.  Crystal structure of the CCAAT box/enhancer-binding protein beta activating transcription factor-4 basic leucine zipper heterodimer in the absence of DNA.

Authors:  L M Podust; A M Krezel; Y Kim
Journal:  J Biol Chem       Date:  2001-01-05       Impact factor: 5.157

10.  A structural-dynamical characterization of human Cox17.

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  7 in total

1.  Human cytochrome P450 17A1 conformational selection: modulation by ligand and cytochrome b5.

Authors:  D Fernando Estrada; Andria L Skinner; Jennifer S Laurence; Emily E Scott
Journal:  J Biol Chem       Date:  2014-03-26       Impact factor: 5.157

2.  Influence of the valine zipper region on the structure and aggregation of the basic leucine zipper (bZIP) domain of activating transcription factor 5 (ATF5).

Authors:  Natalie A Ciaccio; T Steele Reynolds; C Russell Middaugh; Jennifer S Laurence
Journal:  Mol Pharm       Date:  2012-10-23       Impact factor: 4.939

3.  Effects of disulfide bond formation and protein helicity on the aggregation of activating transcription factor 5.

Authors:  Natalie A Ciaccio; Jennifer S Laurence
Journal:  Mol Pharm       Date:  2009 Jul-Aug       Impact factor: 4.939

4.  Regulated ATF5 loss-of-function in adult mice blocks formation and causes regression/eradication of gliomas.

Authors:  A Arias; M W Lamé; L Santarelli; R Hen; L A Greene; J M Angelastro
Journal:  Oncogene       Date:  2011-07-04       Impact factor: 9.867

5.  Regression/eradication of gliomas in mice by a systemically-deliverable ATF5 dominant-negative peptide.

Authors:  Charles C Cates; Angelo D Arias; Lynn S Nakayama Wong; Michael W Lamé; Maxim Sidorov; Geraldine Cayanan; Douglas J Rowland; Jennifer Fung; Georg Karpel-Massler; Markus D Siegelin; Lloyd A Greene; James M Angelastro
Journal:  Oncotarget       Date:  2016-03-15

6.  claMP Tag: a versatile inline metal-binding platform based on the metal abstraction peptide.

Authors:  Brittney J Mills; Qingxin Mu; Mary E Krause; Jennifer S Laurence
Journal:  Bioconjug Chem       Date:  2014-05-21       Impact factor: 4.774

7.  Self-assembly of the bZIP transcription factor ΔFosB.

Authors:  Zhou Yin; Harikanth Venkannagari; Haley Lynch; Galina Aglyamova; Mukund Bhandari; Mischa Machius; Eric J Nestler; Alfred J Robison; Gabby Rudenko
Journal:  Curr Res Struct Biol       Date:  2019-12-24
  7 in total

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