| Literature DB >> 18713462 |
Agda K B Lucio-Eterovic1, Maria A A Cortez, Elvis T Valera, Fabio J N Motta, Rosane G P Queiroz, Helio R Machado, Carlos G Carlotti, Luciano Neder, Carlos A Scrideli, Luiz G Tone.
Abstract
BACKGROUND: Glioblastoma is the most lethal primary malignant brain tumor. Although considerable progress has been made in the treatment of this aggressive tumor, the clinical outcome for patients remains poor. Histone deacetylases (HDACs) are recognized as promising targets for cancer treatment. In the past several years, HDAC inhibitors (HDACis) have been used as radiosensitizers in glioblastoma treatment. However, no study has demonstrated the status of global HDAC expression in gliomas and its possible correlation to the use of HDACis. The purpose of this study was to evaluate and compare mRNA and protein levels of class I, II and IV of HDACs in low grade and high grade astrocytomas and normal brain tissue and to correlate the findings with the malignancy in astrocytomas.Entities:
Mesh:
Substances:
Year: 2008 PMID: 18713462 PMCID: PMC2536671 DOI: 10.1186/1471-2407-8-243
Source DB: PubMed Journal: BMC Cancer ISSN: 1471-2407 Impact factor: 4.430
Figure 1Classification of classes I, II, and IV HDACs by structure and cellular localization.[2,6,44,45].
Figure 2Relative expression of . Class I in purple, class II in orange, and class IV in green. Data obtained by qRT-PCR analysis using Taqman® probes for each gene using the GUS β gene as housekeeping. Standard curves were constructed for each gene by considering at least 3 points in triplicate of 10-fold serial dilution of cDNA in water, starting from 1:10 of a volume of undiluted cDNA transcribed from 1.0 μg of total RNA. The slopes of standard curves ranged from -3.17 to -3.87. Blank and standard controls (calibrators) were run in parallel to verify amplification efficiency within each experiment. To obtain the Ct (cycle) values, we established a threshold of 0.1. *AI, AII and AIII mean astrocytoma grade I, II and III respectively. GBM means glioblastoma.
Relative expression (medians) of HDAC genes in different groups of tumor and normal brain tissue.
| 0.98 | 1.19 | 1.93 | 1.03 | |
| 0.68 | 0.72 | 1.30 | 0.95 | |
| 0.85 | 0.73 | 0.62 | 0.69 | |
| 1.30 | 2.87 | 2.08 | 1.64 | |
| 3.27 | 3.33 | 8.43 | 1.42 | |
| 1.71 | 2.72 | 2.27 | 0.91 | |
| 1.72 | 3.05 | 2.57 | 1.33 | |
| 0.61 | 0.80 | 0.81 | 0.56 | |
| 30.74 | 24.46 | 30.51 | 11.49 | |
| 61.51 | 17.10 | 18.32 | 7.43 | |
| 6.54 | 7.29 | 11.04 | 4.26 | |
| 3.67 | 3.30 | 3.05 | 1.02 |
Statistical comparison (Kruskall-Wallis analysis) of levels of HDAC expression (medians) between low-grade (astrocytomas grade I and II) and high-grade (astrocytomas grade III and glioblastomas) astrocytomas.
| ns | |
| ns | |
| ns | |
| ns | |
| < 0.05 | |
| < 0.01 | |
| < 0.05 | |
| < 0.01 | |
| < 0.0001 | |
| < 0.001 | |
| < 0.001 |
ns: no significant
Statistical comparison (Mann-Whitney analysis) of levels of HDAC expression (medians) between tumor groups.
| Glioblastoma x | ||||
| Normal brain | ns | ns | ns | ns |
| AI and II | ns | ns | ns | ns |
| AIII | ns | ns | ns | ns |
| Glioblastoma x | ||||
| Normal brain | <0.0001 | 0.018 | 0.011 | ns |
| AI and II | 0.012 | ns | 0.001 | ns |
| AIII | 0.010 | ns | 0.010 | 0.008 |
| Glioblastoma x | ||||
| Normal brain | 0.0096 | <0.0001 | 0.015 | 0.0001 |
| AI and II | 0.01 | 0.013 | 0.001 | 0.0003 |
| AIII | ns | ns | ns | 0.023 |
AI, AII, and AIII mean astrocytoma grades I, II and III, respectively.
ns: no significant
Figure 3Protein analysis. (A) HDAC9 and (B) acetyl H3 and acetyl H4 in glioblastoma (GBM), astrocytoma grade III (AIII), astrocytoma grades I and II (AI and II), and normal brain. Actin was used as endogenous control.