Literature DB >> 18712881

Intramolecular electron transfer versus substrate oxidation in lactoperoxidase: investigation of radical intermediates by stopped-flow absorption spectrophotometry and (9-285 GHz) electron paramagnetic resonance spectroscopy.

Alistair J Fielding1, Rahul Singh, Barbara Boscolo, Peter C Loewen, Elena M Ghibaudi, Anabella Ivancich.   

Abstract

We have combined the information obtained from rapid-scan electronic absorption spectrophotometry and multifrequency (9-295 GHz) electron paramagnetic resonance (EPR) spectroscopy to unequivocally determine the electronic nature of the intermediates in milk lactoperoxidase as a function of pH and to monitor their reactivity with organic substrates selected by their different accessibilities to the heme site. The aim was to address the question of the putative catalytic role of the protein-based radicals. This experimental approach allowed us to discriminate between the protein-based radical intermediates and [Fe(IV)=O] species, as well as to directly detect the oxidation products by EPR. The advantageous resolution of the g anisotropy of the Tyr (*) EPR spectrum at high fields showed that the tyrosine of the [Fe(IV)=O Tyr (*)] intermediate has an electropositive and pH-dependent microenvironment [g(x) value of 2.0077(0) at pH >or= 8.0 and 2.0066(2) at 4.0 <or= pH <or= 7.5] possibly related to the radical stability and function. Two types of organic molecules (small aromatic vs bulkier substrates) allowed us to distinguish different mechanisms for substrate oxidation. [Fe(IV)=O Por (*+)] is the oxidizing species of benzohydroxamic acid, o-dianisidine, and o-anisidine via a heme-edge reaction and of mitoxantrone via a long-range electron transfer (favored at pH 8) not involving the tyrosyl radical, the formation of which competed with the substrate oxidation at pH 5. In contrast, the very efficient reaction with ABTS at pH 5 is consistent with [Fe(IV)=O Tyr (*)] being the oxidizing species. Accordingly, the identification of the ABTS binding site by X-ray crystallography may be a valuable tool in rational drug design.

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Year:  2008        PMID: 18712881     DOI: 10.1021/bi801032k

Source DB:  PubMed          Journal:  Biochemistry        ISSN: 0006-2960            Impact factor:   3.162


  6 in total

1.  Heme destruction, the main molecular event during the peroxide-mediated inactivation of chloroperoxidase from Caldariomyces fumago.

Authors:  Marcela Ayala; Cesar V Batista; Rafael Vazquez-Duhalt
Journal:  J Biol Inorg Chem       Date:  2010-09-12       Impact factor: 3.358

2.  Mechanistic insight into the initiation step of the reaction of Burkholderia pseudomallei catalase-peroxidase with peroxyacetic acid.

Authors:  Ben Wiseman; Julie Colin; Andrew T Smith; Anabella Ivancich; Peter C Loewen
Journal:  J Biol Inorg Chem       Date:  2009-03-17       Impact factor: 3.358

3.  Spectroscopic evidence for an engineered, catalytically active Trp radical that creates the unique reactivity of lignin peroxidase.

Authors:  Andrew T Smith; Wendy A Doyle; Pierre Dorlet; Anabella Ivancich
Journal:  Proc Natl Acad Sci U S A       Date:  2009-09-14       Impact factor: 11.205

4.  Identifying the elusive sites of tyrosyl radicals in cytochrome c peroxidase: implications for oxidation of substrates bound at a site remote from the heme.

Authors:  Kyle D Miner; Thomas D Pfister; Parisa Hosseinzadeh; Nadime Karaduman; Lynda J Donald; Peter C Loewen; Yi Lu; Anabella Ivancich
Journal:  Biochemistry       Date:  2014-06-05       Impact factor: 3.162

5.  Formation of compound I in heme bound Aβ-peptides relevant to Alzheimer's disease.

Authors:  Ishita Pal; Arnab Kumar Nath; Madhuparna Roy; Manas Seal; Chandradeep Ghosh; Abhishek Dey; Somdatta Ghosh Dey
Journal:  Chem Sci       Date:  2019-07-25       Impact factor: 9.825

6.  Structural and Biochemical Characterization of a Dye-Decolorizing Peroxidase from Dictyostelium discoideum.

Authors:  Amrita Rai; Johann P Klare; Patrick Y A Reinke; Felix Englmaier; Jörg Fohrer; Roman Fedorov; Manuel H Taft; Igor Chizhov; Ute Curth; Oliver Plettenburg; Dietmar J Manstein
Journal:  Int J Mol Sci       Date:  2021-06-10       Impact factor: 5.923

  6 in total

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