Literature DB >> 18706852

Incorporating collaboratory concepts into informatics in support of translational interdisciplinary biomedical research.

E Sally Lee1, David W McDonald, Nicholas Anderson, Peter Tarczy-Hornoch.   

Abstract

Due to its complex nature, modern biomedical research has become increasingly interdisciplinary and collaborative in nature. Although a necessity, interdisciplinary biomedical collaboration is difficult. There is, however, a growing body of literature on the study and fostering of collaboration in fields such as computer supported cooperative work (CSCW) and information science (IS). These studies of collaboration provide insight into how to potentially alleviate the difficulties of interdisciplinary collaborative research. We, therefore, undertook a cross cutting study of science and engineering collaboratories to identify emergent themes. We review many relevant collaboratory concepts: (a) general collaboratory concepts across many domains: communication, common workspace and coordination, and data sharing and management, (b) specific collaboratory concepts of particular biomedical relevance: data integration and analysis, security structure, metadata and data provenance, and interoperability and data standards, (c) environmental factors that support collaboratories: administrative and management structure, technical support, and available funding as critical environmental factors, and (d) future considerations for biomedical collaboration: appropriate training and long-term planning. In our opinion, the collaboratory concepts we discuss can guide planning and design of future collaborative infrastructure by biomedical informatics researchers to alleviate some of the difficulties of interdisciplinary biomedical collaboration.

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Mesh:

Year:  2008        PMID: 18706852      PMCID: PMC2606933          DOI: 10.1016/j.ijmedinf.2008.06.011

Source DB:  PubMed          Journal:  Int J Med Inform        ISSN: 1386-5056            Impact factor:   4.046


  19 in total

Review 1.  Future directions in evaluation research: people, organizational, and social issues.

Authors:  B Kaplan; N T Shaw
Journal:  Methods Inf Med       Date:  2004       Impact factor: 2.176

2.  Funding high-throughput data sharing.

Authors:  Catherine A Ball; Gavin Sherlock; Alvis Brazma
Journal:  Nat Biotechnol       Date:  2004-09       Impact factor: 54.908

Review 3.  Microarray data analysis: from disarray to consolidation and consensus.

Authors:  David B Allison; Xiangqin Cui; Grier P Page; Mahyar Sabripour
Journal:  Nat Rev Genet       Date:  2006-01       Impact factor: 53.242

4.  Participatory design of a collaborative clinical trial protocol writing system.

Authors:  Chunhua Weng; David W McDonald; Dana Sparks; Jason McCoy; John H Gennari
Journal:  Int J Med Inform       Date:  2006-06-23       Impact factor: 4.046

Review 5.  Data integration and genomic medicine.

Authors:  Brenton Louie; Peter Mork; Fernando Martin-Sanchez; Alon Halevy; Peter Tarczy-Hornoch
Journal:  J Biomed Inform       Date:  2006-03-09       Impact factor: 6.317

6.  A participatory assessment of IS integration needs in maternity clinics using activity theory.

Authors:  Heidi Häkkinen; Mikko Korpela
Journal:  Int J Med Inform       Date:  2006-12-13       Impact factor: 4.046

Review 7.  Health Insurance Portability and Accountability Act of 1996: a tempered victory.

Authors:  A Savoy-Lewis
Journal:  J Law Med Ethics       Date:  1996       Impact factor: 1.718

8.  Asynchronous communication among clinical researchers: a study for systems design.

Authors:  John H Gennari; Chunhua Weng; Jacqueline Benedetti; David W McDonald
Journal:  Int J Med Inform       Date:  2005-10       Impact factor: 4.046

9.  A study of collaboration among medical informatics research laboratories.

Authors:  E H Shortliffe; V L Patel; J J Cimino; G O Barnett; R A Greenes
Journal:  Artif Intell Med       Date:  1998-02       Impact factor: 5.326

Review 10.  Comparing approaches for advanced e-health security infrastructures.

Authors:  Bernd Blobel
Journal:  Int J Med Inform       Date:  2006-10-30       Impact factor: 4.046

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  12 in total

1.  A system dynamics analysis determining willingness to wait and pay for the implementation of data standards in clinical research.

Authors:  Luciana Cofiel; Guilherme R Zammar; Amrapali J Zaveri; Jatin Y Shah; Elias Carvalho; Meredith Nahm; Gustavo Kesselring; Ricardo Pietrobon
Journal:  Health Res Policy Syst       Date:  2010-12-31

2.  Interprofessional collaboration in research, education, and clinical practice: working together for a better future.

Authors:  Bart N Green; Claire D Johnson
Journal:  J Chiropr Educ       Date:  2015-01-16

3.  Application description and policy model in collaborative environment for sharing of information on epidemiological and clinical research data sets.

Authors:  Elias César Araujo de Carvalho; Adelia Portero Batilana; Julie Simkins; Henrique Martins; Jatin Shah; Dimple Rajgor; Anand Shah; Scott Rockart; Ricardo Pietrobon
Journal:  PLoS One       Date:  2010-02-19       Impact factor: 3.240

Review 4.  Research Infrastructure for Collaborative Team Science: Challenges in Technology-Supported Workflows in and Across Laboratories, Institutions, and Geographies.

Authors:  Barbara Mirel; Airong Luo; Marcelline Harris
Journal:  Semin Nephrol       Date:  2015-05       Impact factor: 5.299

5.  To share or not to share? Expected pros and cons of data sharing in radiological research.

Authors:  Francesco Sardanelli; Marco Alì; Myriam G Hunink; Nehmat Houssami; Luca M Sconfienza; Giovanni Di Leo
Journal:  Eur Radiol       Date:  2018-01-18       Impact factor: 5.315

6.  Metadata based management and sharing of distributed biomedical data.

Authors:  Fusheng Wang; Cristobal Vergara-Niedermayr; Peiya Liu
Journal:  Int J Metadata Semant Ontol       Date:  2014

7.  Increasing Opportunity through Interdisciplinary Research: Climbing Down and Shattering a Tower of Babel.

Authors:  Jacqueline C Resnick
Journal:  Front Psychiatry       Date:  2011-05-12       Impact factor: 4.157

8.  Author Credit for Transdisciplinary Collaboration.

Authors:  Jian Xu; Ying Ding; Vincent Malic
Journal:  PLoS One       Date:  2015-09-16       Impact factor: 3.240

9.  DIPSBC--data integration platform for systems biology collaborations.

Authors:  Felix Dreher; Thomas Kreitler; Christopher Hardt; Atanas Kamburov; Reha Yildirimman; Karl Schellander; Hans Lehrach; Bodo M H Lange; Ralf Herwig
Journal:  BMC Bioinformatics       Date:  2012-05-08       Impact factor: 3.169

10.  An open debate about the object and purpose of global health knowledge in the context of an interdisciplinary research partnership on HIV/STI prevention priorities in Peru.

Authors:  Eliana Barrios Suarez; Carmen Logie; Jose F Arocha
Journal:  Global Health       Date:  2014-05-21       Impact factor: 4.185

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