Literature DB >> 16369572

Microarray data analysis: from disarray to consolidation and consensus.

David B Allison1, Xiangqin Cui, Grier P Page, Mahyar Sabripour.   

Abstract

In just a few years, microarrays have gone from obscurity to being almost ubiquitous in biological research. At the same time, the statistical methodology for microarray analysis has progressed from simple visual assessments of results to a weekly deluge of papers that describe purportedly novel algorithms for analysing changes in gene expression. Although the many procedures that are available might be bewildering to biologists who wish to apply them, statistical geneticists are recognizing commonalities among the different methods. Many are special cases of more general models, and points of consensus are emerging about the general approaches that warrant use and elaboration.

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Year:  2006        PMID: 16369572     DOI: 10.1038/nrg1749

Source DB:  PubMed          Journal:  Nat Rev Genet        ISSN: 1471-0056            Impact factor:   53.242


  499 in total

1.  The maternal plasma proteome changes as a function of gestational age in normal pregnancy: a longitudinal study.

Authors:  Roberto Romero; Offer Erez; Eli Maymon; Piya Chaemsaithong; Zhonghui Xu; Percy Pacora; Tinnakorn Chaiworapongsa; Bogdan Done; Sonia S Hassan; Adi L Tarca
Journal:  Am J Obstet Gynecol       Date:  2017-03-03       Impact factor: 8.661

2.  An empirical Bayes' approach to joint analysis of multiple microarray gene expression studies.

Authors:  Lingyan Ruan; Ming Yuan
Journal:  Biometrics       Date:  2011-04-22       Impact factor: 2.571

3.  Evidence for a SAL1-PAP chloroplast retrograde pathway that functions in drought and high light signaling in Arabidopsis.

Authors:  Gonzalo M Estavillo; Peter A Crisp; Wannarat Pornsiriwong; Markus Wirtz; Derek Collinge; Chris Carrie; Estelle Giraud; James Whelan; Pascale David; Hélène Javot; Charles Brearley; Rüdiger Hell; Elena Marin; Barry J Pogson
Journal:  Plant Cell       Date:  2011-11-29       Impact factor: 11.277

4.  Integrating genetic and gene expression evidence into genome-wide association analysis of gene sets.

Authors:  Qing Xiong; Nicola Ancona; Elizabeth R Hauser; Sayan Mukherjee; Terrence S Furey
Journal:  Genome Res       Date:  2011-09-22       Impact factor: 9.043

5.  Aging alters the expression of neurotransmission-regulating proteins in the hippocampal synaptoproteome.

Authors:  Heather D VanGuilder; Han Yan; Julie A Farley; William E Sonntag; Willard M Freeman
Journal:  J Neurochem       Date:  2010-03-31       Impact factor: 5.372

6.  Testing SNPs and sets of SNPs for importance in association studies.

Authors:  Holger Schwender; Ingo Ruczinski; Katja Ickstadt
Journal:  Biostatistics       Date:  2010-07-02       Impact factor: 5.899

7.  Male sex interspecies divergence and down regulation of expression of spermatogenesis genes in Drosophila sterile hybrids.

Authors:  Vignesh Sundararajan; Alberto Civetta
Journal:  J Mol Evol       Date:  2010-11-16       Impact factor: 2.395

8.  Identification of differential translation in genome wide studies.

Authors:  Ola Larsson; Nahum Sonenberg; Robert Nadon
Journal:  Proc Natl Acad Sci U S A       Date:  2010-11-29       Impact factor: 11.205

9.  A hypothesis test for equality of bayesian network models.

Authors:  Anthony Almudevar
Journal:  EURASIP J Bioinform Syst Biol       Date:  2010-10-12

10.  Genomewide analysis of secretory activation in mouse models.

Authors:  Palaniappan Ramanathan; Ian Martin; Peter Thomson; Rosanne Taylor; Christopher Moran; Peter Williamson
Journal:  J Mammary Gland Biol Neoplasia       Date:  2007-11-10       Impact factor: 2.673

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