Literature DB >> 18698327

Diversity of degradation signals in the ubiquitin-proteasome system.

Tommer Ravid1, Mark Hochstrasser.   

Abstract

The ubiquitin-proteasome system degrades an enormous variety of proteins that contain specific degradation signals, or 'degrons'. Besides the degradation of regulatory proteins, almost every protein suffers from sporadic biosynthetic errors or misfolding. Such aberrant proteins can be recognized and rapidly degraded by cells. Structural and functional data on a handful of degrons allow several generalizations regarding their mechanism of action. We focus on different strategies of degron recognition by the ubiquitin system, and contrast regulatory degrons that are subject to signalling-dependent modification with those that are controlled by protein folding or assembly, as frequently occurs during protein quality control.

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Year:  2008        PMID: 18698327      PMCID: PMC2606094          DOI: 10.1038/nrm2468

Source DB:  PubMed          Journal:  Nat Rev Mol Cell Biol        ISSN: 1471-0072            Impact factor:   94.444


  147 in total

1.  CHIP is a U-box-dependent E3 ubiquitin ligase: identification of Hsc70 as a target for ubiquitylation.

Authors:  J Jiang; C A Ballinger; Y Wu; Q Dai; D M Cyr; J Höhfeld; C Patterson
Journal:  J Biol Chem       Date:  2001-09-13       Impact factor: 5.157

2.  ATP-dependent proteases degrade their substrates by processively unraveling them from the degradation signal.

Authors:  C Lee; M P Schwartz; S Prakash; M Iwakura; A Matouschek
Journal:  Mol Cell       Date:  2001-03       Impact factor: 17.970

3.  CHIP is a chaperone-dependent E3 ligase that ubiquitylates unfolded protein.

Authors:  S Murata; Y Minami; M Minami; T Chiba; K Tanaka
Journal:  EMBO Rep       Date:  2001-11-21       Impact factor: 8.807

4.  Multisite phosphorylation of a CDK inhibitor sets a threshold for the onset of DNA replication.

Authors:  P Nash; X Tang; S Orlicky; Q Chen; F B Gertler; M D Mendenhall; F Sicheri; T Pawson; M Tyers
Journal:  Nature       Date:  2001-11-29       Impact factor: 49.962

5.  A conserved ubiquitin ligase of the nuclear envelope/endoplasmic reticulum that functions in both ER-associated and Matalpha2 repressor degradation.

Authors:  R Swanson; M Locher; M Hochstrasser
Journal:  Genes Dev       Date:  2001-10-15       Impact factor: 11.361

6.  Recognition of specific ubiquitin conjugates is important for the proteolytic functions of the ubiquitin-associated domain proteins Dsk2 and Rad23.

Authors:  Hai Rao; Ashwani Sastry
Journal:  J Biol Chem       Date:  2002-01-22       Impact factor: 5.157

7.  C. elegans EGL-9 and mammalian homologs define a family of dioxygenases that regulate HIF by prolyl hydroxylation.

Authors:  A C Epstein; J M Gleadle; L A McNeill; K S Hewitson; J O'Rourke; D R Mole; M Mukherji; E Metzen; M I Wilson; A Dhanda; Y M Tian; N Masson; D L Hamilton; P Jaakkola; R Barstead; J Hodgkin; P H Maxwell; C W Pugh; C J Schofield; P J Ratcliffe
Journal:  Cell       Date:  2001-10-05       Impact factor: 41.582

8.  Targeting of HIF-alpha to the von Hippel-Lindau ubiquitylation complex by O2-regulated prolyl hydroxylation.

Authors:  P Jaakkola; D R Mole; Y M Tian; M I Wilson; J Gielbert; S J Gaskell; A von Kriegsheim; H F Hebestreit; M Mukherji; C J Schofield; P H Maxwell; C W Pugh; P J Ratcliffe
Journal:  Science       Date:  2001-04-05       Impact factor: 47.728

9.  HIFalpha targeted for VHL-mediated destruction by proline hydroxylation: implications for O2 sensing.

Authors:  M Ivan; K Kondo; H Yang; W Kim; J Valiando; M Ohh; A Salic; J M Asara; W S Lane; W G Kaelin
Journal:  Science       Date:  2001-04-05       Impact factor: 47.728

10.  Structure of the Cul1-Rbx1-Skp1-F boxSkp2 SCF ubiquitin ligase complex.

Authors:  Ning Zheng; Brenda A Schulman; Langzhou Song; Julie J Miller; Philip D Jeffrey; Ping Wang; Claire Chu; Deanna M Koepp; Stephen J Elledge; Michele Pagano; Ronald C Conaway; Joan W Conaway; J Wade Harper; Nikola P Pavletich
Journal:  Nature       Date:  2002-04-18       Impact factor: 49.962

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  351 in total

1.  A novel degradation signal derived from distal C-terminal frameshift mutations of KCNQ2 protein which cause neonatal epilepsy.

Authors:  Jun Su; Xu Cao; KeWei Wang
Journal:  J Biol Chem       Date:  2011-09-21       Impact factor: 5.157

Review 2.  The N-end rule pathway: emerging functions and molecular principles of substrate recognition.

Authors:  Shashikanth M Sriram; Bo Yeon Kim; Yong Tae Kwon
Journal:  Nat Rev Mol Cell Biol       Date:  2011-10-21       Impact factor: 94.444

Review 3.  Roles for the ubiquitin-proteasome pathway in protein quality control and signaling in the retina: implications in the pathogenesis of age-related macular degeneration.

Authors:  Fu Shang; Allen Taylor
Journal:  Mol Aspects Med       Date:  2012-04-10

Review 4.  Psychological stress and aging: role of glucocorticoids (GCs).

Authors:  K M Mehedi Hasan; Md Shaifur Rahman; K M T Arif; Mahbub E Sobhani
Journal:  Age (Dordr)       Date:  2011-10-05

5.  SUMO-independent in vivo activity of a SUMO-targeted ubiquitin ligase toward a short-lived transcription factor.

Authors:  Yang Xie; Eric M Rubenstein; Tanja Matt; Mark Hochstrasser
Journal:  Genes Dev       Date:  2010-04-13       Impact factor: 11.361

Review 6.  Integration of clearance mechanisms: the proteasome and autophagy.

Authors:  Esther Wong; Ana Maria Cuervo
Journal:  Cold Spring Harb Perspect Biol       Date:  2010-11-10       Impact factor: 10.005

7.  Receptor for advanced glycation end products is targeted by FBXO10 for ubiquitination and degradation.

Authors:  John Evankovich; Travis Lear; Alison Mckelvey; Sarah Dunn; James Londino; Yuan Liu; Bill B Chen; Rama K Mallampalli
Journal:  FASEB J       Date:  2017-05-17       Impact factor: 5.191

Review 8.  Molecular and cellular regulation of human glucokinase.

Authors:  Shawn M Sternisha; Brian G Miller
Journal:  Arch Biochem Biophys       Date:  2019-01-11       Impact factor: 4.013

Review 9.  Posttranslational modification and quality control.

Authors:  Xuejun Wang; J Scott Pattison; Huabo Su
Journal:  Circ Res       Date:  2013-01-18       Impact factor: 17.367

Review 10.  Ubiquitin-proteasome signaling in lung injury.

Authors:  Natalia D Magnani; Laura A Dada; Jacob I Sznajder
Journal:  Transl Res       Date:  2018-04-23       Impact factor: 7.012

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