Literature DB >> 18690543

Effects of genomic imprinting on quantitative traits.

Hamish G Spencer1.   

Abstract

Standard Mendelian genetic processes incorporate several symmetries, one of which is that the level of expression of a gene inherited from an organism's mother is identical to the level should that gene have been inherited paternally. For a small number of loci in a variety of taxa, this symmetry does not hold; such genes are said to be "genomically imprinted" (or simply "imprinted"). The best known examples of imprinted loci come from mammals and angiosperms, although there are also cases from several insects and some data suggesting that imprinting exists in zebra fish. Imprinting means that reciprocal heterozygotes need not be, on average, phenotypically identical. When this difference is incorporated into the standard quantitative-genetic model for two alleles at a single locus, a number of standard expressions are altered in fundamental ways. Most importantly, in contrast to the case with euMendelian expression, the additive and dominance deviations are correlated. It would clearly be of interest to be able to separate imprinting effects from maternal genetic effects, but when the latter are added to the model, the well-known generalized least-squares approach to deriving breeding values cannot be applied. Distinguishing these two types of parent-of-origin effects is not a simple problem and requires further research.

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Year:  2008        PMID: 18690543     DOI: 10.1007/s10709-008-9300-8

Source DB:  PubMed          Journal:  Genetica        ISSN: 0016-6707            Impact factor:   1.082


  45 in total

1.  Allelic expression of IGF2 in marsupials and birds.

Authors:  M J O'Neill; R S Ingram; P B Vrana; S M Tilghman
Journal:  Dev Genes Evol       Date:  2000-01       Impact factor: 0.900

Review 2.  Population genetics and evolution of genomic imprinting.

Authors:  H G Spencer
Journal:  Annu Rev Genet       Date:  2000       Impact factor: 16.830

3.  Monotreme IGF2 expression and ancestral origin of genomic imprinting.

Authors:  J K Killian; C M Nolan; N Stewart; B L Munday; N A Andersen; S Nicol; R L Jirtle
Journal:  J Exp Zool       Date:  2001-08-15

4.  On the detection of imprinted quantitative trait loci in experimental crosses of outbred species.

Authors:  Dirk-Jan de Koning; Henk Bovenhuis; Johan A M van Arendonk
Journal:  Genetics       Date:  2002-06       Impact factor: 4.562

5.  Haplotype sharing refines the location of an imprinted quantitative trait locus with major effect on muscle mass to a 250-kb chromosome segment containing the porcine IGF2 gene.

Authors:  Carine Nezer; Catherine Collette; Laurence Moreau; Benoît Brouwers; Jong-Joo Kim; Elisabetta Giuffra; Nadine Buys; Leif Andersson; Michel Georges
Journal:  Genetics       Date:  2003-09       Impact factor: 4.562

6.  Perspective: maternal kin groups and the origins of asymmetric genetic systems-genomic imprinting, haplodiploidy, and parthenogenesis.

Authors:  Benjamin B Normark
Journal:  Evolution       Date:  2006-04       Impact factor: 3.694

7.  Dependence of the R-mottled aleurone phenotype in maize on mode of sexual transmission.

Authors:  J L Kermicle
Journal:  Genetics       Date:  1970-09       Impact factor: 4.562

Review 8.  A census of mammalian imprinting.

Authors:  Ian M Morison; Joshua P Ramsay; Hamish G Spencer
Journal:  Trends Genet       Date:  2005-08       Impact factor: 11.639

9.  Parental genomic imprinting of the human IGF2 gene.

Authors:  N Giannoukakis; C Deal; J Paquette; C G Goodyer; C Polychronakos
Journal:  Nat Genet       Date:  1993-05       Impact factor: 38.330

10.  Parent-of-origin effects on seed development in Arabidopsis thaliana.

Authors:  R J Scott; M Spielman; J Bailey; H G Dickinson
Journal:  Development       Date:  1998-09       Impact factor: 6.868

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  15 in total

1.  Rethinking inheritance, yet again: inheritomes, contextomes and dynamic phenotypes.

Authors:  N G Prasad; Sutirth Dey; Amitabh Joshi; T N C Vidya
Journal:  J Genet       Date:  2015-09       Impact factor: 1.166

2.  One- and two-locus population models with differential viability between sexes: parallels between haploid parental selection and genomic imprinting.

Authors:  Alexey Yanchukov
Journal:  Genetics       Date:  2009-05-17       Impact factor: 4.562

3.  Relative contribution of additive, dominance, and imprinting effects to phenotypic variation in body size and growth between divergent selection lines of mice.

Authors:  Reinmar Hager; James M Cheverud; Jason B Wolf
Journal:  Evolution       Date:  2008-02-02       Impact factor: 3.694

4.  Parent-of-origin effects on voluntary exercise levels and body composition in mice.

Authors:  Scott A Kelly; Derrick L Nehrenberg; Kunjie Hua; Ryan R Gordon; Theodore Garland; Daniel Pomp
Journal:  Physiol Genomics       Date:  2009-11-10       Impact factor: 3.107

5.  Quantitative genetics of costly neonatal sexual size dimorphism in squirrel monkeys (Saimiri boliviensis).

Authors:  G E Blomquist; L E Williams
Journal:  J Evol Biol       Date:  2013-02-25       Impact factor: 2.411

6.  Applying Quantitative Genetic Methods to Primate Social Behavior.

Authors:  Gregory E Blomquist; Lauren J N Brent
Journal:  Int J Primatol       Date:  2014-02-01       Impact factor: 2.264

7.  Paternal genetic contribution influences fetal vulnerability to maternal alcohol consumption in a rat model of fetal alcohol spectrum disorder.

Authors:  Laura J Sittig; Eva E Redei
Journal:  PLoS One       Date:  2010-04-07       Impact factor: 3.240

8.  DNA sequence polymorphisms in a panel of eight candidate bovine imprinted genes and their association with performance traits in Irish Holstein-Friesian cattle.

Authors:  David A Magee; Klaudia M Sikora; Erik W Berkowicz; Donagh P Berry; Dawn J Howard; Michael P Mullen; Ross D Evans; Charles Spillane; David E MacHugh
Journal:  BMC Genet       Date:  2010-10-13       Impact factor: 2.797

9.  DNA sequence polymorphisms within the bovine guanine nucleotide-binding protein Gs subunit alpha (Gsα)-encoding (GNAS) genomic imprinting domain are associated with performance traits.

Authors:  Klaudia M Sikora; David A Magee; Erik W Berkowicz; Donagh P Berry; Dawn J Howard; Michael P Mullen; Ross D Evans; David E Machugh; Charles Spillane
Journal:  BMC Genet       Date:  2011-01-07       Impact factor: 2.797

Review 10.  Genomic imprinting effects on complex traits in domesticated animal species.

Authors:  Alan M O'Doherty; David E MacHugh; Charles Spillane; David A Magee
Journal:  Front Genet       Date:  2015-04-24       Impact factor: 4.599

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