Literature DB >> 18689462

Free-energy linkage between folding and calcium binding in EF-hand proteins.

Marisa C Suarez1, Cristiane B Rocha, Martha M Sorenson, Jerson L Silva, Debora Foguel.   

Abstract

Troponin is the singular Ca(2+)-sensitive protein in the contraction of vertebrate striated muscles. Troponin C (TnC), the Ca(2+)-binding subunit of the troponin complex, has two distinct domains, C and N, which have different properties despite their extensive structural homology. In this work, we analyzed the thermodynamic stability of the isolated N-domain of TnC using a fluorescent mutant with Phe 29 replaced by Trp (F29W/N-domain, residues 1-90). The complete unfolding of the N-domain of TnC in the absence or presence of Ca(2+) was achieved by combining high hydrostatic pressure and urea, a maneuver that allowed us to calculate the thermodynamic parameters (DeltaV and DeltaG(atm)). In this study, we propose that part of the affinity for Ca(2+) is contributed by the free-energy change of folding of the N- and C-domains that takes place when Ca(2+) binds. The importance of the free-energy change for the structural and regulatory functions of the TnC isolated domains was evaluated. Our results shed light on how the coupling between folding and ion binding contributes to the fine adjustment of the affinity for Ca(2+) in EF-hand proteins, which is crucial to function.

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Year:  2008        PMID: 18689462      PMCID: PMC2576379          DOI: 10.1529/biophysj.108.135715

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  39 in total

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3.  V(i)-value analysis: a pressure-based method for mapping the folding transition state ensemble of proteins.

Authors:  Lally Mitra; Kazumi Hata; Ryohei Kono; Akihiro Maeno; Daniel Isom; Jean-Baptiste Rouget; Roland Winter; Kazuyuki Akasaka; Bertrand García-Moreno; Catherine A Royer
Journal:  J Am Chem Soc       Date:  2007-10-26       Impact factor: 15.419

Review 4.  A new look at thin filament regulation in vertebrate skeletal muscle.

Authors:  J M Squire; E P Morris
Journal:  FASEB J       Date:  1998-07       Impact factor: 5.191

5.  Relationship between stability and function for isolated domains of troponin C.

Authors:  R S Fredricksen; C A Swenson
Journal:  Biochemistry       Date:  1996-11-05       Impact factor: 3.162

6.  Mechanism of direct coupling between binding and induced structural change in regulatory calcium binding proteins.

Authors:  S M Gagné; M X Li; B D Sykes
Journal:  Biochemistry       Date:  1997-04-15       Impact factor: 3.162

7.  Denaturant m values and heat capacity changes: relation to changes in accessible surface areas of protein unfolding.

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Journal:  Protein Sci       Date:  1995-10       Impact factor: 6.725

Review 8.  Molecular tuning of ion binding to calcium signaling proteins.

Authors:  J J Falke; S K Drake; A L Hazard; O B Peersen
Journal:  Q Rev Biophys       Date:  1994-08       Impact factor: 5.318

9.  Properties of isolated recombinant N and C domains of chicken troponin C.

Authors:  M X Li; M Chandra; J R Pearlstone; K I Racher; G Trigo-Gonzalez; T Borgford; C M Kay; L B Smillie
Journal:  Biochemistry       Date:  1994-02-01       Impact factor: 3.162

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Authors:  C S Farah; F C Reinach
Journal:  FASEB J       Date:  1995-06       Impact factor: 5.191

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  4 in total

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Journal:  Biophys J       Date:  2010-05-19       Impact factor: 4.033

2.  Auto-inhibitory role of the EF-SAM domain of STIM proteins in store-operated calcium entry.

Authors:  Le Zheng; Peter B Stathopulos; Rainer Schindl; Guang-Yao Li; Christoph Romanin; Mitsuhiko Ikura
Journal:  Proc Natl Acad Sci U S A       Date:  2011-01-07       Impact factor: 11.205

3.  Docking of calcium ions in proteins with flexible side chains and deformable backbones.

Authors:  Ricky C K Cheng; Boris S Zhorov
Journal:  Eur Biophys J       Date:  2009-11-25       Impact factor: 1.733

4.  A hypothesis to reconcile the physical and chemical unfolding of proteins.

Authors:  Guilherme A P de Oliveira; Jerson L Silva
Journal:  Proc Natl Acad Sci U S A       Date:  2015-05-11       Impact factor: 11.205

  4 in total

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