Literature DB >> 18684121

Myroides profundi sp. nov., isolated from deep-sea sediment of the southern Okinawa Trough.

Xi-Ying Zhang1, Yan-Jiao Zhang, Xiu-Lan Chen, Qi-Long Qin, Dian-Li Zhao, Tie-Gang Li, Hong-Yue Dang, Yu-Zhong Zhang.   

Abstract

A Gram-negative, nonmotile, aerobic and oxidase- and catalase-positive bacterium, designated D25T, was isolated from the deep-sea sediments of the southern Okinawa Trough area. Phylogenetic analyses of 16S rRNA gene sequences showed that strain D25T fell within the genus Myroides, with 99.2%, 96.0% and 93.4% sequence similarities to the only three recognized species of Myroides. However, the DNA-DNA similarity value between strain D25T and its nearest neighbour Myroides odoratimimus JCM 7460T was only 49.9% (<70%). Several phenotypic properties could be used to distinguish strain D25T from other Myroides species. The main cellular fatty acids of strain D25T were iso-C15:0, iso-C17:1omega9c, iso-C17:03-OH and Summed Feature 3 (comprising C16:1omega7c and/or iso-C15:02-OH). The major respiratory quinone was MK-6. The DNA G+C content was 33.0 mol%. The results of the polyphasic taxonomy analysis suggested that strain D25T represents a novel species of the genus Myroides, for which the name Myroides profundi sp. nov. is proposed. The type strain is D25T (=CCTCC M 208030T=DSM 19823T).

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Year:  2008        PMID: 18684121     DOI: 10.1111/j.1574-6968.2008.01299.x

Source DB:  PubMed          Journal:  FEMS Microbiol Lett        ISSN: 0378-1097            Impact factor:   2.742


  13 in total

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Authors:  Xiu-Lan Chen; Bin-Bin Xie; Fei Bian; Guo-Yan Zhao; Hui-Lin Zhao; Hai-Lun He; Bai-Cheng Zhou; Yu-Zhong Zhang
Journal:  Appl Environ Microbiol       Date:  2009-02-05       Impact factor: 4.792

2.  Characterization of a novel subtilisin-like protease myroicolsin from deep sea bacterium Myroides profundi D25 and molecular insight into its collagenolytic mechanism.

Authors:  Li-Yuan Ran; Hai-Nan Su; Ming-Yang Zhou; Lei Wang; Xiu-Lan Chen; Bin-Bin Xie; Xiao-Yan Song; Mei Shi; Qi-Long Qin; Xiuhua Pang; Bai-Cheng Zhou; Yu-Zhong Zhang; Xi-Ying Zhang
Journal:  J Biol Chem       Date:  2014-01-15       Impact factor: 5.157

3.  MYROIDES INFECTION IN A BABOON AFTER PROLONGED PIG KIDNEY GRAFT SURVIVAL.

Authors:  Hong Liu; Hayato Iwase; Martin Wijkstrom; Jagjit Singh; Edwin Klein; Robert Wagner; Abhinav Humar; William Pasculle; David K C Cooper
Journal:  Transplant Direct       Date:  2015-05

Review 4.  Antibiotic resistance mechanisms of Myroides sp.

Authors:  Shao-hua Hu; Shu-xing Yuan; Hai Qu; Tao Jiang; Ya-jun Zhou; Ming-xi Wang; De-song Ming
Journal:  J Zhejiang Univ Sci B       Date:  2016-03       Impact factor: 3.066

5.  Myroides odoratimimus bacteremia in a diabetic patient.

Authors:  Tiana R Endicott-Yazdani; Neelam Dhiman; Raul Benavides; Cedric W Spak
Journal:  Proc (Bayl Univ Med Cent)       Date:  2015-07

6.  Septic shock, pneumonia, and soft tissue infection due to Myroides odoratimimus: report of a case and review of Myroides infections.

Authors:  P Benedetti; M Rassu; G Pavan; A Sefton; G Pellizzer
Journal:  Infection       Date:  2011-01-19       Impact factor: 3.553

Review 7.  Implementing best practices and validation of cryopreservation techniques for microorganisms.

Authors:  David Smith; Matthew Ryan
Journal:  ScientificWorldJournal       Date:  2012-05-02

8.  Mechanistic insight into the elastin degradation process by the metalloprotease myroilysin from the deep-sea bacterium Myroides profundi D25.

Authors:  Jie Yang; Hui-Lin Zhao; Bai-Lu Tang; Xiu-Lan Chen; Hai-Nan Su; Xi-Ying Zhang; Xiao-Yan Song; Bai-Cheng Zhou; Bin-Bin Xie; Anthony S Weiss; Yu-Zhong Zhang
Journal:  Mar Drugs       Date:  2015-03-18       Impact factor: 5.118

9.  Nascent Genomic Evolution and Allopatric Speciation of Myroides profundi D25 in Its Transition from Land to Ocean.

Authors:  Yu-Zhong Zhang; Yi Li; Bin-Bin Xie; Xiu-Lan Chen; Qiong-Qiong Yao; Xi-Ying Zhang; Megan L Kempher; Jizhong Zhou; Aharon Oren; Qi-Long Qin
Journal:  MBio       Date:  2016-01-12       Impact factor: 7.867

10.  Whole-genome sequencing of a large collection of Myroides odoratimimus and Myroides odoratus isolates and antimicrobial susceptibility studies.

Authors:  Florian Gunzer; Wolfram W Rudolph; Boyke Bunk; Isabel Schober; Sonja Peters; Theres Müller; Boris Oberheitmann; Percy Schröttner
Journal:  Emerg Microbes Infect       Date:  2018-04-04       Impact factor: 7.163

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