Literature DB >> 18677557

Preimplantation HLA haplotyping using tri-, tetra-, and pentanucleotide short tandem repeats for HLA matching.

Sarah L Bick1, David P Bick, Brent E Wells, Mark R Roesler, Estil Y Strawn, Eduardo C Lau.   

Abstract

PURPOSE: To aid couples wishing to conceive children who are HLA matched to a sibling in need of a hematopoietic progenitor cell transplant, we developed a preimplantation HLA haplotype analysis of embryos that utilizes tri-, tetra-, and pentanucleotide STR markers.
METHODS: For preimplantation HLA genotyping, we use polymorphic STR markers located across the HLA and flanking regions, selecting exclusively tri-, tetra-, and pentanucleotide repeats. These markers can be resolved using either capillary electrophoresis (CE) or polyacrylamide gels.
RESULTS: We have developed 43 reliable STR markers for preimplantation HLA matching. Selected STR markers enabled unambiguous identification of embryos whose HLA haplotypes were matched with the affected patient using polyacrylamide gel or capillary electrophoresis.
CONCLUSIONS: The use of tri-, tetra-, and pentanucleotide repeat markers and polyacrylamide gels for STR genotyping in HLA matching is a simple and cost effective approach to clinical testing.

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Year:  2008        PMID: 18677557      PMCID: PMC2596682          DOI: 10.1007/s10815-008-9233-2

Source DB:  PubMed          Journal:  J Assist Reprod Genet        ISSN: 1058-0468            Impact factor:   3.412


  17 in total

1.  High-density map of short tandem repeats across the human major histocompatibility complex.

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2.  Genotyping of simple sequence repeats--factors implicated in shadow band generation revisited.

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Review 3.  Preimplantation genetic diagnosis.

Authors:  David P Bick; Eduardo C Lau
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4.  Tandem repeats finder: a program to analyze DNA sequences.

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5.  Short tandem repeats haplotyping of the HLA region in preimplantation HLA matching.

Authors:  Francesco Fiorentino; Semra Kahraman; Hüseyin Karadayi; Anil Biricik; Semra Sertyel; Güvenc Karlikaya; Yaman Saglam; Daniele Podini; Andrea Nuccitelli; Marina Baldi
Journal:  Eur J Hum Genet       Date:  2005-08       Impact factor: 4.246

Review 6.  Preimplantation genetics: Improving access to stem cell therapy.

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8.  Successful hematopoietic stem cell transplantation for Fanconi anemia from an unaffected HLA-genotype-identical sibling selected using preimplantation genetic diagnosis.

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10.  Development and clinical application of a strategy for preimplantation genetic diagnosis of single gene disorders combined with HLA matching.

Authors:  F Fiorentino; A Biricik; H Karadayi; H Berkil; G Karlikaya; S Sertyel; D Podini; M Baldi; M C Magli; L Gianaroli; S Kahraman
Journal:  Mol Hum Reprod       Date:  2004-03-25       Impact factor: 4.025

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6.  Amelioration of Hyperbilirubinemia in Gunn Rats after Transplantation of Human Induced Pluripotent Stem Cell-Derived Hepatocytes.

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